RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 SPRED2Q7Z698 418 aa18.4■□□□□ 0.54
HDDC2-210ENST00000609574 MYOCDQ8IZQ8 938 aa18.4■□□□□ 0.54
HDDC2-210ENST00000609574 ANKS1AQ92625 1134 aa18.4■□□□□ 0.54
HDDC2-210ENST00000609574 CTAGE1Q96RT6 745 aa18.4■□□□□ 0.54
HDDC2-210ENST00000609574 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
HDDC2-210ENST00000609574 MLXIPQ9HAP2 919 aa18.4■□□□□ 0.54
HDDC2-210ENST00000609574 COL20A1Q9P218 1284 aa18.4■□□□□ 0.54
HDDC2-210ENST00000609574 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.39■□□□□ 0.53
HDDC2-210ENST00000609574 C17orf102A2RUQ5 167 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 TGFB3P10600 412 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
HDDC2-210ENST00000609574 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 SEPT8Q92599 483 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 YME1L1Q96TA2 773 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 KRT23Q9C075 422 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 JMJD4Q9H9V9 463 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 LCTP09848 1927 aa18.39■□□□□ 0.53
HDDC2-210ENST00000609574 FAM86C2PA6NEL3 165 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 HAS3O00219 553 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 GNAT1P11488 350 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 CELF3Q5SZQ8 465 aaKnown RBP18.38■□□□□ 0.53
HDDC2-210ENST00000609574 MYSM1Q5VVJ2 828 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 PTCRAQ6ISU1 281 aaPredicted RBP18.38■□□□□ 0.53
HDDC2-210ENST00000609574 EP400NLQ6ZTU2 488 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 DBF4BQ8NFT6 615 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 ATP6V0A1Q93050 837 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 CNNM2Q9H8M5 875 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 NEDD4P46934 1319 aa18.38■□□□□ 0.53
HDDC2-210ENST00000609574 B4E1Z4 1266 aa18.37■□□□□ 0.53
HDDC2-210ENST00000609574 HIP1O00291 1037 aa18.37■□□□□ 0.53
HDDC2-210ENST00000609574 GGPS1O95749 300 aa18.37■□□□□ 0.53
HDDC2-210ENST00000609574 SDSP20132 328 aa18.37■□□□□ 0.53
HDDC2-210ENST00000609574 CCND2P30279 289 aa18.37■□□□□ 0.53
HDDC2-210ENST00000609574 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
HDDC2-210ENST00000609574 TIGD5Q53EQ6 642 aa18.37■□□□□ 0.53
HDDC2-210ENST00000609574 IFIT1BQ5T764 474 aaKnown RBP18.37■□□□□ 0.53
HDDC2-210ENST00000609574 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.37■□□□□ 0.53
HDDC2-210ENST00000609574 FAM178BQ8IXR5 827 aa18.37■□□□□ 0.53
HDDC2-210ENST00000609574 MRPL38Q96DV4 380 aaKnown RBP18.37■□□□□ 0.53
HDDC2-210ENST00000609574 PRR33A8MZF0 331 aa18.36■□□□□ 0.53
HDDC2-210ENST00000609574 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
HDDC2-210ENST00000609574 HSD17B4P51659 736 aa18.36■□□□□ 0.53
HDDC2-210ENST00000609574 HDAC1Q13547 482 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-210ENST00000609574 TRIM71Q2Q1W2 868 aaKnown RBP18.36■□□□□ 0.53
HDDC2-210ENST00000609574 ENAHQ8N8S7 591 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-210ENST00000609574 PDCD2LQ9BRP1 358 aa18.36■□□□□ 0.53
HDDC2-210ENST00000609574 C17orf80Q9BSJ5 609 aa18.36■□□□□ 0.53
HDDC2-210ENST00000609574 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
HDDC2-210ENST00000609574 PCDHA1Q9Y5I3 950 aa18.36■□□□□ 0.53
HDDC2-210ENST00000609574 KLRF2D3W0D1 207 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 H3BRB1 525 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 GCOM1H8Y6P7 765 aaPredicted RBP18.35■□□□□ 0.53
HDDC2-210ENST00000609574 SORBS3O60504 671 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 CAND2O75155 1236 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 POLR2MP0CAP2 368 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 GPM6BQ13491 265 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 GNPTABQ3T906 1256 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 EPC2Q52LR7 807 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 CWC27Q6UX04 472 aaKnown RBP18.35■□□□□ 0.53
HDDC2-210ENST00000609574 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 SERINC5Q86VE9 423 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.35■□□□□ 0.53
HDDC2-210ENST00000609574 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 TUT1Q9H6E5 874 aaKnown RBP18.35■□□□□ 0.53
HDDC2-210ENST00000609574 TET1Q8NFU7 2136 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 TANC1Q9C0D5 1861 aa18.35■□□□□ 0.53
HDDC2-210ENST00000609574 TRIP12Q14669 1992 aaPredicted RBP18.34■□□□□ 0.53
HDDC2-210ENST00000609574 GRXCR2A6NFK2 248 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 ZBTB5O15062 677 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 NCK2O43639 380 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 UPP2O95045 317 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 HOXD8P13378 290 aaPredicted RBP18.34■□□□□ 0.53
HDDC2-210ENST00000609574 HTRA4P83105 476 aaPredicted RBP18.34■□□□□ 0.53
HDDC2-210ENST00000609574 TCTN1Q2MV58 587 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 HSDL1Q3SXM5 330 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 PLEKHG4Q58EX7 1191 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 BANK1Q8NDB2 785 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
HDDC2-210ENST00000609574 HOXA13P31271 388 aaPredicted RBP18.33■□□□□ 0.52
HDDC2-210ENST00000609574 TRDNQ13061 729 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 NEDD9Q14511 834 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 MBTPS1Q14703 1052 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 PGM5Q15124 567 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 TRAF7Q6Q0C0 670 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 APBB2Q92870 758 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 KHSRPQ92945 711 aaKnown RBP eCLIP18.33■□□□□ 0.52
HDDC2-210ENST00000609574 DSCC1Q9BVC3 393 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 UPF3BQ9BZI7 483 aaKnown RBP18.33■□□□□ 0.52
HDDC2-210ENST00000609574 RWDD1Q9H446 243 aaPredicted RBP18.33■□□□□ 0.52
HDDC2-210ENST00000609574 CD320Q9NPF0 282 aa18.33■□□□□ 0.52
HDDC2-210ENST00000609574 REV3LO60673 3130 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 H3BNC9 293 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 SMIM10L2AP0DMW4 78 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 SMIM10L2BP0DMW5 78 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 IL9P15248 144 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 FCHSD1Q86WN1 690 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 TMEM192Q8IY95 271 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms