RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 PFKMP08237 780 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
TOM1-218ENST00000608674 ZNF286BP0CG31 522 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 RFC2P35250 354 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 MFSD10Q14728 455 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 TSGA10IPQ3SY00 556 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 XRRA1Q6P2D8 792 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 TMTC3Q6ZXV5 915 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 SESTD1Q86VW0 696 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 RBM28Q9NW13 759 aaKnown RBP15.23■□□□□ 0.03
TOM1-218ENST00000608674 RTEL1Q9NZ71 1219 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 CXXC1Q9P0U4 656 aaPredicted RBP15.23■□□□□ 0.03
TOM1-218ENST00000608674 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
TOM1-218ENST00000608674 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 NOP56O00567 594 aaKnown RBP15.22■□□□□ 0.03
TOM1-218ENST00000608674 ACTN1P12814 892 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 EXOSC10Q01780 885 aaKnown RBP15.22■□□□□ 0.03
TOM1-218ENST00000608674 SP2Q02086 613 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 NEDD9Q14511 834 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 RAB30Q15771 203 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 HSDL1Q3SXM5 330 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 GDF6Q6KF10 455 aaPredicted RBP15.22■□□□□ 0.03
TOM1-218ENST00000608674 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 HEATR3Q7Z4Q2 680 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 CAGE1Q8TC20 777 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 MYLIPQ8WY64 445 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 GPKOWQ92917 476 aaPredicted RBP eCLIP15.22■□□□□ 0.03
TOM1-218ENST00000608674 TCEANC2Q96MN5 208 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 INPP4AQ96PE3 977 aaPredicted RBP15.22■□□□□ 0.03
TOM1-218ENST00000608674 PBX4Q9BYU1 374 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
TOM1-218ENST00000608674 ZNF576Q9H609 170 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 HDAC6Q9UBN7 1215 aa15.22■□□□□ 0.03
TOM1-218ENST00000608674 NAP1L2Q9ULW6 460 aaPredicted RBP15.22■□□□□ 0.03
TOM1-218ENST00000608674 FRMPD4Q14CM0 1322 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 MEIS2O14770 477 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 ZBTB43O43298 467 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 FIBPO43427 364 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 F2P00734 622 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 IQCF3P0C7M6 154 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 FOSL2P15408 326 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 MRPS9P82933 396 aaKnown RBP15.21■□□□□ 0.03
TOM1-218ENST00000608674 RTN1Q16799 776 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 ADCK5Q3MIX3 580 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 PCNX4Q63HM2 1172 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 NLRX1Q86UT6 975 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 GTF2IRD1Q9UHL9 959 aa15.21■□□□□ 0.03
TOM1-218ENST00000608674 MYO9BQ13459 2157 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 SPDYE3A6NKU9 549 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 GOLGA8AA7E2F4 631 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 GOLGA8BA8MQT2 603 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 SPATA31C2B4DYI2 1134 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 HOXD8P13378 290 aaPredicted RBP15.2■□□□□ 0.02
TOM1-218ENST00000608674 ICAM3P32942 547 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 PBX2P40425 430 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 CYFIP1Q7L576 1253 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 AFAP1L1Q8TED9 768 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 EHMT1Q9H9B1 1298 aa15.2■□□□□ 0.02
TOM1-218ENST00000608674 KIAA1217Q5T5P2 1943 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 KLF18A0A0U1RQI7 1052 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 HAS3O00219 553 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 REC8O95072 547 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 SELPP16109 830 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 ATP2A2P16615 1042 aaKnown RBP15.19■□□□□ 0.02
TOM1-218ENST00000608674 GRIN2CQ14957 1233 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 UBE2SQ16763 222 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 METTL7BQ6UX53 244 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 MAFAQ8NHW3 353 aaPredicted RBP15.19■□□□□ 0.02
TOM1-218ENST00000608674 CDHR1Q96JP9 859 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 USP26Q9BXU7 913 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
TOM1-218ENST00000608674 CHD9Q3L8U1 2897 aa15.18■□□□□ 0.02
TOM1-218ENST00000608674 H3BRB1 525 aa15.18■□□□□ 0.02
TOM1-218ENST00000608674 PARNO95453 639 aaKnown RBP15.18■□□□□ 0.02
TOM1-218ENST00000608674 NAPAP54920 295 aa15.18■□□□□ 0.02
TOM1-218ENST00000608674 PTK7Q13308 1070 aa15.18■□□□□ 0.02
TOM1-218ENST00000608674 GIMAP8Q8ND71 665 aaPredicted RBP15.18■□□□□ 0.02
TOM1-218ENST00000608674 VWCEQ96DN2 955 aa15.18■□□□□ 0.02
TOM1-218ENST00000608674 JAKMIP1Q96N16 626 aaKnown RBP15.18■□□□□ 0.02
TOM1-218ENST00000608674 GAS2L1Q99501 681 aaPredicted RBP15.18■□□□□ 0.02
TOM1-218ENST00000608674 SENP7Q9BQF6 1050 aa15.18■□□□□ 0.02
TOM1-218ENST00000608674 NKX2-4Q9H2Z4 354 aa15.18■□□□□ 0.02
TOM1-218ENST00000608674 TUT1Q9H6E5 874 aaKnown RBP15.18■□□□□ 0.02
TOM1-218ENST00000608674 V9GY48 417 aaPredicted RBP15.18■□□□□ 0.02
TOM1-218ENST00000608674 CCDC196A0A1B0GTZ2 297 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 C17orf102A2RUQ5 167 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 LGALS2P05162 132 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 CKBP12277 381 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 RABGGTBP53611 331 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 RCAN1P53805 252 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 ZNF200P98182 395 aaPredicted RBP15.17■□□□□ 0.02
TOM1-218ENST00000608674 SP4Q02446 784 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 SEMA3FQ13275 785 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
TOM1-218ENST00000608674 BLOC1S2Q6QNY1 142 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms