RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 NCK2O43639 380 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 NR3C2P08235 984 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 RSPH10BP0C881 870 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 ZNF200P98182 395 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-214ENST00000607020 HIC1Q14526 733 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 CDC37Q16543 378 aaPredicted RBP17.52■□□□□ 0.4
SSBP4-214ENST00000607020 MCMDC2Q4G0Z9 681 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 DHX37Q8IY37 1157 aaKnown RBP17.52■□□□□ 0.4
SSBP4-214ENST00000607020 MYOCDQ8IZQ8 938 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 TOP1MTQ969P6 601 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 FBXL18Q96ME1 805 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 UIMC1Q96RL1 719 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.4
SSBP4-214ENST00000607020 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
SSBP4-214ENST00000607020 H3BQ06 376 aaPredicted RBP17.51■□□□□ 0.39
SSBP4-214ENST00000607020 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 HSPD1P10809 573 aaKnown RBP17.51■□□□□ 0.39
SSBP4-214ENST00000607020 HOXC8P31273 242 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 GHRHRQ02643 423 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 ARHGEF16Q5VV41 709 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 MYSM1Q5VVJ2 828 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 MFSD6Q6ZSS7 791 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 ADHFE1Q8IWW8 467 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 ANKS1AQ92625 1134 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 UPF3BQ9BZI7 483 aaKnown RBP17.51■□□□□ 0.39
SSBP4-214ENST00000607020 NSUN3Q9H649 340 aaKnown RBP17.51■□□□□ 0.39
SSBP4-214ENST00000607020 MRVI1Q9Y6F6 885 aa17.51■□□□□ 0.39
SSBP4-214ENST00000607020 CAND2O75155 1236 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 GPM6BQ13491 265 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 CCDC178Q5BJE1 867 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 TCEAL5Q5H9L2 206 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 CELF3Q5SZQ8 465 aaKnown RBP17.5■□□□□ 0.39
SSBP4-214ENST00000607020 TMEM192Q8IY95 271 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 ADGRF4Q8IZF3 695 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 SEPT8Q92599 483 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
SSBP4-214ENST00000607020 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
SSBP4-214ENST00000607020 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
SSBP4-214ENST00000607020 RGS20O76081 388 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 ZNF286BP0CG31 522 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 TGFB3P10600 412 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 EIF2AK2P19525 551 aaKnown RBP17.49■□□□□ 0.39
SSBP4-214ENST00000607020 THPOP40225 353 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 HSD17B4P51659 736 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 CTC1Q2NKJ3 1217 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 FBXO11Q86XK2 927 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 SAMD3Q8N6K7 520 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 ESR2Q92731 530 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 C16orf70Q9BSU1 422 aa17.49■□□□□ 0.39
SSBP4-214ENST00000607020 COL4A4P53420 1690 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-214ENST00000607020 QRICH1Q2TAL8 776 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 HSDL1Q3SXM5 330 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 STOX1Q6ZVD7 989 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 VSIG10LQ86VR7 867 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 PNMA1Q8ND90 353 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 MFSD14AQ96MC6 490 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 SPATA33Q96N06 139 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 YME1L1Q96TA2 773 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 PDCD2LQ9BRP1 358 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 PCDHB15Q9Y5E8 787 aa17.48■□□□□ 0.39
SSBP4-214ENST00000607020 A0A0D9SFI3 127 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.47■□□□□ 0.39
SSBP4-214ENST00000607020 C17orf102A2RUQ5 167 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 C5orf67F2Z3F1 127 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 RB1P06400 928 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 LTBRP36941 435 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 HAND2P61296 217 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 SMAD2Q15796 467 aaKnown RBP17.47■□□□□ 0.39
SSBP4-214ENST00000607020 ASPRV1Q53RT3 343 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 TBC1D10CQ8IV04 446 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 LMAN2LQ9H0V9 348 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 JMJD4Q9H9V9 463 aa17.47■□□□□ 0.39
SSBP4-214ENST00000607020 OPLAHO14841 1288 aa17.46■□□□□ 0.39
SSBP4-214ENST00000607020 IRS1P35568 1242 aa17.46■□□□□ 0.39
SSBP4-214ENST00000607020 HERC4Q5GLZ8 1057 aaPredicted RBP17.46■□□□□ 0.39
SSBP4-214ENST00000607020 HFE2Q6ZVN8 426 aa17.46■□□□□ 0.39
SSBP4-214ENST00000607020 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
SSBP4-214ENST00000607020 APBB2Q92870 758 aa17.46■□□□□ 0.39
SSBP4-214ENST00000607020 PTPRSQ13332 1948 aa17.46■□□□□ 0.39
SSBP4-214ENST00000607020 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 H3BRB1 525 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 GGPS1O95749 300 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 CFBP00751 764 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 SP2Q02086 613 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 FAM26DQ5JW98 314 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 POP1Q99575 1024 aaKnown RBP17.45■□□□□ 0.38
SSBP4-214ENST00000607020 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 TUT1Q9H6E5 874 aaKnown RBP17.45■□□□□ 0.38
SSBP4-214ENST00000607020 KAT14Q9H8E8 782 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 CLDND1Q9NY35 253 aa17.45■□□□□ 0.38
SSBP4-214ENST00000607020 TRIP12Q14669 1992 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-214ENST00000607020 RBAK-RBAKDNI3L0D1 243 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 TREHO43280 583 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 LINC00271P0C7V0 271 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 BMPR1AP36894 532 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms