RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 MICALL1Q8N3F8 863 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 CERS4Q9HA82 394 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 CKBP12277 381 aa28.17■■■□□ 2.1
SNX5-219ENST00000606602 RBL2Q08999 1139 aa28.17■■■□□ 2.1
SNX5-219ENST00000606602 GPNMBQ14956 572 aa28.17■■■□□ 2.1
SNX5-219ENST00000606602 HSDL1Q3SXM5 330 aa28.17■■■□□ 2.1
SNX5-219ENST00000606602 PIBF1Q8WXW3 757 aa28.17■■■□□ 2.1
SNX5-219ENST00000606602 ASB2Q96Q27 587 aa28.17■■■□□ 2.1
SNX5-219ENST00000606602 KIAA1217Q5T5P2 1943 aa28.17■■■□□ 2.1
SNX5-219ENST00000606602 RFXAPO00287 272 aa28.16■■■□□ 2.1
SNX5-219ENST00000606602 PARNO95453 639 aaKnown RBP28.16■■■□□ 2.1
SNX5-219ENST00000606602 TGFB3P10600 412 aa28.16■■■□□ 2.1
SNX5-219ENST00000606602 HOXD8P13378 290 aaPredicted RBP28.16■■■□□ 2.1
SNX5-219ENST00000606602 SP2Q02086 613 aa28.16■■■□□ 2.1
SNX5-219ENST00000606602 PTK7Q13308 1070 aa28.16■■■□□ 2.1
SNX5-219ENST00000606602 MAP4K1Q92918 833 aa28.16■■■□□ 2.1
SNX5-219ENST00000606602 TANC1Q9C0D5 1861 aa28.16■■■□□ 2.1
SNX5-219ENST00000606602 UBA1P22314 1058 aaKnown RBP28.15■■■□□ 2.1
SNX5-219ENST00000606602 ANTXR2P58335 489 aa28.15■■■□□ 2.1
SNX5-219ENST00000606602 MRPS5P82675 430 aaKnown RBP28.15■■■□□ 2.1
SNX5-219ENST00000606602 IGDCC4Q8TDY8 1250 aa28.15■■■□□ 2.1
SNX5-219ENST00000606602 GPKOWQ92917 476 aaPredicted RBP eCLIP28.15■■■□□ 2.1
SNX5-219ENST00000606602 TSPYL2Q9H2G4 693 aaPredicted RBP28.15■■■□□ 2.1
SNX5-219ENST00000606602 MLXIPQ9HAP2 919 aa28.15■■■□□ 2.1
SNX5-219ENST00000606602 MYO9BQ13459 2157 aa28.14■■■□□ 2.1
SNX5-219ENST00000606602 WDR5P61964 334 aaKnown RBP28.14■■■□□ 2.1
SNX5-219ENST00000606602 ZNF200P98182 395 aaPredicted RBP28.14■■■□□ 2.1
SNX5-219ENST00000606602 TAP1Q03518 808 aa28.14■■■□□ 2.1
SNX5-219ENST00000606602 CNKSR3Q6P9H4 555 aa28.14■■■□□ 2.1
SNX5-219ENST00000606602 RBM8AQ9Y5S9 174 aaKnown RBP28.14■■■□□ 2.1
SNX5-219ENST00000606602 TLL1O43897 1013 aa28.13■■■□□ 2.09
SNX5-219ENST00000606602 NBNO60934 754 aa28.13■■■□□ 2.09
SNX5-219ENST00000606602 ARHGEF15O94989 841 aa28.13■■■□□ 2.09
SNX5-219ENST00000606602 CXCL10P02778 98 aa28.13■■■□□ 2.09
SNX5-219ENST00000606602 MB21D2Q8IYB1 491 aaPredicted RBP28.13■■■□□ 2.09
SNX5-219ENST00000606602 ARNTL2Q8WYA1 636 aa28.13■■■□□ 2.09
SNX5-219ENST00000606602 TTC28Q96AY4 2481 aa28.13■■■□□ 2.09
SNX5-219ENST00000606602 GTPBP6O43824 516 aaPredicted RBP28.12■■■□□ 2.09
SNX5-219ENST00000606602 TRIM71Q2Q1W2 868 aaKnown RBP28.12■■■□□ 2.09
SNX5-219ENST00000606602 WNT8BQ93098 351 aa28.12■■■□□ 2.09
SNX5-219ENST00000606602 ZBED2Q9BTP6 218 aa28.12■■■□□ 2.09
SNX5-219ENST00000606602 EPOPA6NHQ4 379 aa28.11■■■□□ 2.09
SNX5-219ENST00000606602 HIC1Q14526 733 aa28.11■■■□□ 2.09
SNX5-219ENST00000606602 GNPTABQ3T906 1256 aa28.11■■■□□ 2.09
SNX5-219ENST00000606602 ZNF618Q5T7W0 954 aa28.11■■■□□ 2.09
SNX5-219ENST00000606602 TMCO2Q7Z6W1 182 aaPredicted RBP28.11■■■□□ 2.09
SNX5-219ENST00000606602 IL27Q8NEV9 243 aa28.11■■■□□ 2.09
SNX5-219ENST00000606602 CTCFLQ8NI51 663 aaPredicted RBP28.11■■■□□ 2.09
SNX5-219ENST00000606602 C16orf70Q9BSU1 422 aa28.11■■■□□ 2.09
SNX5-219ENST00000606602 MTCH2Q9Y6C9 303 aa28.11■■■□□ 2.09
SNX5-219ENST00000606602 TNFRSF10AO00220 468 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 DEFB103AP81534 67 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 MRPS9P82933 396 aaKnown RBP28.1■■■□□ 2.09
SNX5-219ENST00000606602 SKIV2LQ15477 1246 aaKnown RBP28.1■■■□□ 2.09
SNX5-219ENST00000606602 TRAF7Q6Q0C0 670 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 ZNF654Q8IZM8 581 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 RRP36Q96EU6 259 aaKnown RBP28.1■■■□□ 2.09
SNX5-219ENST00000606602 MAP3K14Q99558 947 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 MYL10Q9BUA6 226 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 BCAS3Q9H6U6 928 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 LY9Q9HBG7 655 aa28.1■■■□□ 2.09
SNX5-219ENST00000606602 ABHD14A-ACY1A0A1B0GW23 586 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 NOP56O00567 594 aaKnown RBP28.09■■■□□ 2.09
SNX5-219ENST00000606602 DDAH1O94760 285 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 POU3F3P20264 500 aaPredicted RBP28.09■■■□□ 2.09
SNX5-219ENST00000606602 KIF5BP33176 963 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 TCTN1Q2MV58 587 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 CASC1Q6TDU7 716 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 ADAMTS19Q8TE59 1207 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 SPZ1Q9BXG8 430 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 RTEL1Q9NZ71 1219 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 FRMPD4Q14CM0 1322 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 TET1Q8NFU7 2136 aa28.09■■■□□ 2.09
SNX5-219ENST00000606602 H3BRB1 525 aa28.08■■■□□ 2.09
SNX5-219ENST00000606602 PRC1O43663 620 aa28.08■■■□□ 2.09
SNX5-219ENST00000606602 STAM2O75886 525 aa28.08■■■□□ 2.09
SNX5-219ENST00000606602 IKBKEQ14164 716 aa28.08■■■□□ 2.09
SNX5-219ENST00000606602 SMARCC2Q8TAQ2 1214 aa28.08■■■□□ 2.09
SNX5-219ENST00000606602 INPP4AQ96PE3 977 aaPredicted RBP28.08■■■□□ 2.09
SNX5-219ENST00000606602 TUT1Q9H6E5 874 aaKnown RBP28.08■■■□□ 2.09
SNX5-219ENST00000606602 TRANK1O15050 2925 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 C17orf102A2RUQ5 167 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 LCHNA4D1U4 455 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 SPATA31C2B4DYI2 1134 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 LGALS2P05162 132 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 ICAM3P32942 547 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 THPOP40225 353 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 NEDD9Q14511 834 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 MBTPS1Q14703 1052 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 NFXL1Q6ZNB6 911 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 SERINC5Q86VE9 423 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 CUL5Q93034 780 aa28.07■■■□□ 2.08
SNX5-219ENST00000606602 SEC63Q9UGP8 760 aaKnown RBP28.07■■■□□ 2.08
SNX5-219ENST00000606602 TRIP12Q14669 1992 aaPredicted RBP28.07■■■□□ 2.08
SNX5-219ENST00000606602 RBAK-RBAKDNI3L0D1 243 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 FIBPO43427 364 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 EFCAB14O75071 495 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 KRT40Q6A162 431 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 USP17L6PQ6QN14 398 aa28.06■■■□□ 2.08
SNX5-219ENST00000606602 CYFIP1Q7L576 1253 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms