RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 LARP6Q9BRS8 491 aaKnown RBP14.15□□□□□ -0.14
CTSA-210ENST00000606000 NOC4LQ9BVI4 516 aaKnown RBP14.15□□□□□ -0.14
CTSA-210ENST00000606000 USP26Q9BXU7 913 aa14.15□□□□□ -0.14
CTSA-210ENST00000606000 PSTPIP2Q9H939 334 aa14.15□□□□□ -0.14
CTSA-210ENST00000606000 V9GY48 417 aaPredicted RBP14.15□□□□□ -0.14
CTSA-210ENST00000606000 SZT2Q5T011 3432 aa14.15□□□□□ -0.14
CTSA-210ENST00000606000 LAMA3Q16787 3333 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 NID2Q14112 1375 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 STXBP3O00186 592 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 ADAMTS3O15072 1205 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 CELF3Q5SZQ8 465 aaKnown RBP14.14□□□□□ -0.15
CTSA-210ENST00000606000 MYSM1Q5VVJ2 828 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 PCNX4Q63HM2 1172 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 PPTC7Q8NI37 304 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 EMID1Q96A84 441 aaPredicted RBP14.14□□□□□ -0.15
CTSA-210ENST00000606000 SCLYQ96I15 445 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 SPATA33Q96N06 139 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 INPP4AQ96PE3 977 aaPredicted RBP14.14□□□□□ -0.15
CTSA-210ENST00000606000 CTAGE1Q96RT6 745 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 ALG1Q9BT22 464 aa14.14□□□□□ -0.15
CTSA-210ENST00000606000 KPNA6O60684 536 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 NAPAP54920 295 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 LAMC2Q13753 1193 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 TOB2Q14106 344 aaPredicted RBP14.13□□□□□ -0.15
CTSA-210ENST00000606000 DGKDQ16760 1214 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 FAM109BQ6ICB4 259 aaPredicted RBP14.13□□□□□ -0.15
CTSA-210ENST00000606000 GDF6Q6KF10 455 aaPredicted RBP14.13□□□□□ -0.15
CTSA-210ENST00000606000 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 TMEM199Q8N511 208 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 VWCEQ96DN2 955 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 AGXT2Q9BYV1 514 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 UPF3BQ9BZI7 483 aaKnown RBP14.13□□□□□ -0.15
CTSA-210ENST00000606000 NCOA5Q9HCD5 579 aaKnown RBP14.13□□□□□ -0.15
CTSA-210ENST00000606000 TMEM260Q9NX78 707 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 PCDHA6Q9UN73 950 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 PCDHA8Q9Y5H6 950 aa14.13□□□□□ -0.15
CTSA-210ENST00000606000 GBF1Q92538 1859 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 SPATA31C2B4DYI2 1134 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 F2P00734 622 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 HOXD8P13378 290 aaPredicted RBP14.12□□□□□ -0.15
CTSA-210ENST00000606000 ITGB5P18084 799 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 PSMA5P28066 241 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 ICAM3P32942 547 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 PSEN2P49810 448 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 RCAN1P53805 252 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 SP4Q02446 784 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 PPIGQ13427 754 aaKnown RBP eCLIP14.12□□□□□ -0.15
CTSA-210ENST00000606000 HIC1Q14526 733 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 MFSD10Q14728 455 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 TMEM240Q5SV17 173 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 KCNV1Q6PIU1 500 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 ZNF365Q70YC5 407 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 RUFY3Q7L099 469 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 DEFB123Q8N688 67 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 PHKBQ93100 1093 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 FAM161BQ96MY7 647 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 SEZ6LQ9BYH1 1024 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 MLXIPQ9HAP2 919 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 ZSWIM6Q9HCJ5 1215 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 PKD2L1Q9P0L9 805 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 HDAC6Q9UBN7 1215 aa14.12□□□□□ -0.15
CTSA-210ENST00000606000 SPDYE3A6NKU9 549 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 HAS3O00219 553 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 FIBPO43427 364 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 ATP9AO75110 1047 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 ADCY7P51828 1080 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 CCT2P78371 535 aaKnown RBP14.11□□□□□ -0.15
CTSA-210ENST00000606000 PKN1Q16512 942 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 PTGISQ16647 500 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 KIAA0753Q2KHM9 967 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 GNPTABQ3T906 1256 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 CYFIP1Q7L576 1253 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 TRIM50Q86XT4 487 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
CTSA-210ENST00000606000 C16orf70Q9BSU1 422 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 IL23AQ9NPF7 189 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 RIC8AQ9NPQ8 531 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 BARHL2Q9NY43 387 aa14.11□□□□□ -0.15
CTSA-210ENST00000606000 SMCO2A6NFE2 343 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 GRXCR1A8MXD5 290 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 EPB41L2O43491 1005 aaKnown RBP14.1□□□□□ -0.15
CTSA-210ENST00000606000 DTNBO60941 627 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 STAM2O75886 525 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 TGFB3P10600 412 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 SCG2P13521 617 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
CTSA-210ENST00000606000 ZNF200P98182 395 aaPredicted RBP14.1□□□□□ -0.15
CTSA-210ENST00000606000 PTPN11Q06124 597 aaPredicted RBP14.1□□□□□ -0.15
CTSA-210ENST00000606000 NTRK3Q16288 839 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 PFKFB3Q16875 520 aaPredicted RBP14.1□□□□□ -0.15
CTSA-210ENST00000606000 PPP1R18Q6NYC8 613 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 FBXL16Q8N461 479 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 WNT8BQ93098 351 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 GPR20Q99678 358 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 ANO3Q9BYT9 981 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 CXXC1Q9P0U4 656 aaPredicted RBP14.1□□□□□ -0.15
CTSA-210ENST00000606000 GTF2IRD1Q9UHL9 959 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 UBIAD1Q9Y5Z9 338 aa14.1□□□□□ -0.15
CTSA-210ENST00000606000 LGALS2P05162 132 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 SUPT20HL2P0C7V6 817 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms