RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 VCANP13611 3396 aa22.04■■□□□ 1.12
SRSF4-206ENST00000605204 BAZ2BQ9UIF8 2168 aaKnown RBP22.04■■□□□ 1.12
SRSF4-206ENST00000605204 CPLX1O14810 134 aa22.03■■□□□ 1.12
SRSF4-206ENST00000605204 KIAA0355O15063 1070 aa22.03■■□□□ 1.12
SRSF4-206ENST00000605204 RGS20O76081 388 aa22.03■■□□□ 1.12
SRSF4-206ENST00000605204 LY6KQ17RY6 165 aa22.03■■□□□ 1.12
SRSF4-206ENST00000605204 NLRX1Q86UT6 975 aa22.03■■□□□ 1.12
SRSF4-206ENST00000605204 FAM177A1Q8N128 213 aaPredicted RBP22.03■■□□□ 1.12
SRSF4-206ENST00000605204 NTRK3Q16288 839 aa22.02■■□□□ 1.12
SRSF4-206ENST00000605204 DGKDQ16760 1214 aa22.02■■□□□ 1.12
SRSF4-206ENST00000605204 FAM126BQ8IXS8 530 aa22.02■■□□□ 1.12
SRSF4-206ENST00000605204 DHX37Q8IY37 1157 aaKnown RBP22.02■■□□□ 1.12
SRSF4-206ENST00000605204 CCDC148Q8NFR7 591 aa22.02■■□□□ 1.12
SRSF4-206ENST00000605204 COPS5Q92905 334 aa22.02■■□□□ 1.12
SRSF4-206ENST00000605204 TMEM39AQ9NV64 488 aa22.02■■□□□ 1.12
SRSF4-206ENST00000605204 CDKL5O76039 1030 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 MMP3P08254 477 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 MYL3P08590 195 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 PTGS1P23219 599 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 GNA11P29992 359 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 MRPS9P82933 396 aaKnown RBP22.01■■□□□ 1.11
SRSF4-206ENST00000605204 PTPN11Q06124 597 aaPredicted RBP22.01■■□□□ 1.11
SRSF4-206ENST00000605204 FAAP100Q0VG06 881 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 NEDD9Q14511 834 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 CELF3Q5SZQ8 465 aaKnown RBP22.01■■□□□ 1.11
SRSF4-206ENST00000605204 GIMAP8Q8ND71 665 aaPredicted RBP22.01■■□□□ 1.11
SRSF4-206ENST00000605204 AFG1LQ8WV93 481 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 GPRASP2Q96D09 838 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 KATNAL1Q9BW62 490 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 PCDHA6Q9UN73 950 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 PCDHA8Q9Y5H6 950 aa22.01■■□□□ 1.11
SRSF4-206ENST00000605204 SMCO2A6NFE2 343 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 SPATA31C2B4DYI2 1134 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 MAFGO15525 162 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 UBA1P22314 1058 aaKnown RBP22■■□□□ 1.11
SRSF4-206ENST00000605204 CCT2P78371 535 aaKnown RBP22■■□□□ 1.11
SRSF4-206ENST00000605204 UBE2SQ16763 222 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 TYW1BQ6NUM6 668 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 NFRKBQ6P4R8 1299 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 BICD2Q8TD16 824 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 SENP7Q9BQF6 1050 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 ZMYND12Q9H0C1 365 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 C6orf50Q9HD87 102 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 TBX21Q9UL17 535 aa22■■□□□ 1.11
SRSF4-206ENST00000605204 SUPT20HL2P0C7V6 817 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 HOXD8P13378 290 aaPredicted RBP21.99■■□□□ 1.11
SRSF4-206ENST00000605204 C9orf50Q5SZB4 431 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 MYSM1Q5VVJ2 828 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 FAM161BQ96MY7 647 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 SLC26A6Q9BXS9 759 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 SH3GLB2Q9NR46 395 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 TRIM43BA6NCK2 446 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 PPFIA4O75335 1185 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 GGPS1O95749 300 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 CD4P01730 458 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 RAG1P15918 1043 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 PKN1Q16512 942 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 METTL7BQ6UX53 244 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 SH3RF1Q7Z6J0 888 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 PHKBQ93100 1093 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 TRIM43Q96BQ3 446 aaPredicted RBP21.99■■□□□ 1.11
SRSF4-206ENST00000605204 SPATA33Q96N06 139 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 MLXIPQ9HAP2 919 aa21.99■■□□□ 1.11
SRSF4-206ENST00000605204 NCOA5Q9HCD5 579 aaKnown RBP21.99■■□□□ 1.11
SRSF4-206ENST00000605204 SPTBN5Q9NRC6 3674 aaKnown RBP21.98■■□□□ 1.11
SRSF4-206ENST00000605204 GRIN2DO15399 1336 aa21.98■■□□□ 1.11
SRSF4-206ENST00000605204 CLK2P49760 499 aaKnown RBP21.98■■□□□ 1.11
SRSF4-206ENST00000605204 SSRP1Q08945 709 aaKnown RBP21.98■■□□□ 1.11
SRSF4-206ENST00000605204 REXO1Q8N1G1 1221 aaKnown RBP21.98■■□□□ 1.11
SRSF4-206ENST00000605204 SLKQ9H2G2 1235 aaPredicted RBP21.98■■□□□ 1.11
SRSF4-206ENST00000605204 KIAA1217Q5T5P2 1943 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 DEXIO95424 95 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 SREBF1P36956 1147 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 PSMC6P62333 389 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 MTMR1Q13613 665 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 C8orf34Q49A92 452 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 SESTD1Q86VW0 696 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 ANO3Q9BYT9 981 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 RTEL1Q9NZ71 1219 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 UBIAD1Q9Y5Z9 338 aa21.97■■□□□ 1.11
SRSF4-206ENST00000605204 NOP56O00567 594 aaKnown RBP21.96■■□□□ 1.11
SRSF4-206ENST00000605204 F2P00734 622 aa21.96■■□□□ 1.11
SRSF4-206ENST00000605204 TIMP1P01033 207 aa21.96■■□□□ 1.11
SRSF4-206ENST00000605204 SHHQ15465 462 aa21.96■■□□□ 1.11
SRSF4-206ENST00000605204 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
SRSF4-206ENST00000605204 JADE2Q9NQC1 790 aa21.96■■□□□ 1.11
SRSF4-206ENST00000605204 STK36Q9NRP7 1315 aa21.95■■□□□ 1.1
SRSF4-206ENST00000605204 PFKFB2O60825 505 aa21.95■■□□□ 1.1
SRSF4-206ENST00000605204 SEC24BO95487 1268 aa21.95■■□□□ 1.1
SRSF4-206ENST00000605204 AK2P54819 239 aa21.95■■□□□ 1.1
SRSF4-206ENST00000605204 NBPF20Q3BBV1 942 aa21.95■■□□□ 1.1
SRSF4-206ENST00000605204 BADQ92934 168 aa21.95■■□□□ 1.1
SRSF4-206ENST00000605204 B4GALT4O60513 344 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 ITGB5P18084 799 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 ITGB8P26012 769 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 NEK4P51957 841 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 SP2Q02086 613 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 SEMA3FQ13275 785 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 HSDL1Q3SXM5 330 aa21.94■■□□□ 1.1
SRSF4-206ENST00000605204 FAM47CQ5HY64 1035 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms