RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 TMEM240Q5SV17 173 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 CELF3Q5SZQ8 465 aaKnown RBP12.3□□□□□ -0.44
TUBE1-210ENST00000604967 RASIP1Q5U651 963 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 DHX38Q92620 1227 aaKnown RBP12.3□□□□□ -0.44
TUBE1-210ENST00000604967 C16orf70Q9BSU1 422 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 UPF3BQ9BZI7 483 aaKnown RBP12.3□□□□□ -0.44
TUBE1-210ENST00000604967 PSTPIP2Q9H939 334 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 TMEM260Q9NX78 707 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 EYSQ5T1H1 3165 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 REC8O95072 547 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 PDIA3P30101 505 aaKnown RBP12.29□□□□□ -0.44
TUBE1-210ENST00000604967 CCL23P55773 120 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 PCNX4Q63HM2 1172 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 GDF6Q6KF10 455 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-210ENST00000604967 PPTC7Q8NI37 304 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 PHKBQ93100 1093 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 SCLYQ96I15 445 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 MPHOSPH6Q99547 160 aaKnown RBP12.29□□□□□ -0.44
TUBE1-210ENST00000604967 HIPK3Q9H422 1215 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 RBM28Q9NW13 759 aaKnown RBP12.29□□□□□ -0.44
TUBE1-210ENST00000604967 CXXC1Q9P0U4 656 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-210ENST00000604967 SEC63Q9UGP8 760 aaKnown RBP12.29□□□□□ -0.44
TUBE1-210ENST00000604967 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 CHD7Q9P2D1 2997 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 MYH7BA7E2Y1 1941 aa12.29□□□□□ -0.44
TUBE1-210ENST00000604967 GRXCR1A8MXD5 290 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 B4DLN1 442 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 ZEB2O60315 1214 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 F2P00734 622 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 HMGB1P09429 215 aaKnown RBP12.28□□□□□ -0.44
TUBE1-210ENST00000604967 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
TUBE1-210ENST00000604967 MRPL12P52815 198 aaKnown RBP12.28□□□□□ -0.44
TUBE1-210ENST00000604967 RCAN1P53805 252 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 RUFY3Q7L099 469 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 SMARCC2Q8TAQ2 1214 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 OSBPL7Q9BZF2 842 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 RIC8AQ9NPQ8 531 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 PCDHA6Q9UN73 950 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 PCDHA8Q9Y5H6 950 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 UBIAD1Q9Y5Z9 338 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 SCN5AQ14524 2016 aa12.28□□□□□ -0.44
TUBE1-210ENST00000604967 KCNA2P16389 499 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 PSEN2P49810 448 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
TUBE1-210ENST00000604967 CHMP4BP1P59074 171 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 CCT2P78371 535 aaKnown RBP12.27□□□□□ -0.45
TUBE1-210ENST00000604967 TRAF1Q13077 416 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 LAMC2Q13753 1193 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 TRIM71Q2Q1W2 868 aaKnown RBP12.27□□□□□ -0.45
TUBE1-210ENST00000604967 NFRKBQ6P4R8 1299 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 TRAF7Q6Q0C0 670 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 ZNF365Q70YC5 407 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 CYFIP1Q7L576 1253 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 TRIM50Q86XT4 487 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.45
TUBE1-210ENST00000604967 CRYGNQ8WXF5 182 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 SPATA33Q96N06 139 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-210ENST00000604967 BARHL2Q9NY43 387 aa12.27□□□□□ -0.45
TUBE1-210ENST00000604967 NAP1L2Q9ULW6 460 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-210ENST00000604967 TLR3O15455 904 aaKnown RBP12.26□□□□□ -0.45
TUBE1-210ENST00000604967 EPB41L2O43491 1005 aaKnown RBP12.26□□□□□ -0.45
TUBE1-210ENST00000604967 KPNA6O60684 536 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 TGFB3P10600 412 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 HOXC8P31273 242 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 PBX2P40425 430 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 NAPAP54920 295 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 MFSD10Q14728 455 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 DGKDQ16760 1214 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 PFKFB3Q16875 520 aaPredicted RBP12.26□□□□□ -0.45
TUBE1-210ENST00000604967 FAM47CQ5HY64 1035 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 SYNE3Q6ZMZ3 975 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 SESTD1Q86VW0 696 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 DEFB123Q8N688 67 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 IL17RAQ96F46 866 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 RNPC3Q96LT9 517 aaKnown RBP12.26□□□□□ -0.45
TUBE1-210ENST00000604967 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 GUCD1Q96NT3 240 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 GPR20Q99678 358 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 ALG1Q9BT22 464 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 TM6SF1Q9BZW5 370 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 PKD2L1Q9P0L9 805 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 GTF2IRD1Q9UHL9 959 aa12.26□□□□□ -0.45
TUBE1-210ENST00000604967 TET1Q8NFU7 2136 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 GSTTP1A0A1W2PQM5 241 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 SMCO2A6NFE2 343 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 PRPF3O43395 683 aaKnown RBP12.25□□□□□ -0.45
TUBE1-210ENST00000604967 FIBPO43427 364 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 PPFIA4O75335 1185 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 LGALS2P05162 132 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 ARP10275 920 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 SCG2P13521 617 aa12.25□□□□□ -0.45
TUBE1-210ENST00000604967 MBTPS1Q14703 1052 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms