RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-223ENST00000603232 PCDHA6Q9UN73 950 aa17.17■□□□□ 0.34
CELF4-223ENST00000603232 PCDHA8Q9Y5H6 950 aa17.17■□□□□ 0.34
CELF4-223ENST00000603232 DOCK1Q14185 1865 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 USP2O75604 605 aaPredicted RBP17.16■□□□□ 0.34
CELF4-223ENST00000603232 HOXA7P31268 230 aaPredicted RBP17.16■□□□□ 0.34
CELF4-223ENST00000603232 SUPT20HL1Q3ZLR7 823 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 CST9Q5W186 159 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 CCDC170Q8IYT3 715 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 CHP1Q99653 195 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 VIPAS39Q9H9C1 493 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 ABCB6Q9NP58 842 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 BARHL2Q9NY43 387 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 MAD2L2Q9UI95 211 aa17.16■□□□□ 0.34
CELF4-223ENST00000603232 BICDL2A1A5D9 508 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 RPS6KA5O75582 802 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 ABL1P00519 1130 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 INPP5BP32019 993 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 UBA7P41226 1012 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
CELF4-223ENST00000603232 TSR1Q2NL82 804 aaKnown RBP17.15■□□□□ 0.34
CELF4-223ENST00000603232 WDR59Q6PJI9 974 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 PHF20L1A8MW92 1017 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 RASA1P20936 1047 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 TFAP4Q01664 338 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 TYW1BQ6NUM6 668 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 FAM114A1Q8IWE2 563 aa17.15■□□□□ 0.34
CELF4-223ENST00000603232 MAGEC2Q9UBF1 373 aaPredicted RBP17.15■□□□□ 0.34
CELF4-223ENST00000603232 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
CELF4-223ENST00000603232 GREB1LQ9C091 1923 aaPredicted RBP17.14■□□□□ 0.34
CELF4-223ENST00000603232 A0A1W2PQJ5 194 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 ANO9A1A5B4 782 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
CELF4-223ENST00000603232 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
CELF4-223ENST00000603232 AKR1B1P15121 316 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 CCNE1P24864 410 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 ACTN2P35609 894 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 PMS1P54277 932 aaKnown RBP17.14■□□□□ 0.33
CELF4-223ENST00000603232 VSNL1P62760 191 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 TATDN1Q6P1N9 297 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 CLEC10AQ8IUN9 316 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
CELF4-223ENST00000603232 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.33
CELF4-223ENST00000603232 WRNIP1Q96S55 665 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 C7orf25Q9BPX7 421 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 ZNF341Q9BYN7 854 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 ZMYND12Q9H0C1 365 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 TMEM60Q9H2L4 133 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 ACBD3Q9H3P7 528 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
CELF4-223ENST00000603232 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 EIF3CLB5ME19 914 aaKnown RBP17.13■□□□□ 0.33
CELF4-223ENST00000603232 STXBP3O00186 592 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 KRT86O43790 486 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 TBC1D12O60347 775 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 NF2P35240 595 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 CYLC1P35663 651 aaPredicted RBP17.13■□□□□ 0.33
CELF4-223ENST00000603232 C1QTNF8P60827 252 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 HERVK_113P62684 666 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 DCAF15Q66K64 600 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 CCDC84Q86UT8 332 aaPredicted RBP17.13■□□□□ 0.33
CELF4-223ENST00000603232 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
CELF4-223ENST00000603232 EIF3CQ99613 913 aaKnown RBP17.13■□□□□ 0.33
CELF4-223ENST00000603232 SPZ1Q9BXG8 430 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 MED4Q9NPJ6 270 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 EXOC1Q9NV70 894 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 COBLO75128 1261 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 USP14P54578 494 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 ZBED6P86452 979 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 CKAP4Q07065 602 aaKnown RBP17.13■□□□□ 0.33
CELF4-223ENST00000603232 CASP8Q14790 479 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 FAM71BQ8TC56 605 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.33
CELF4-223ENST00000603232 KLRG1Q96E93 195 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 TRIM47Q96LD4 638 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
CELF4-223ENST00000603232 SWAP70Q9UH65 585 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 SAR1BQ9Y6B6 198 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 PHIPQ8WWQ0 1821 aa17.13■□□□□ 0.33
CELF4-223ENST00000603232 CYTH3O43739 400 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
CELF4-223ENST00000603232 KRT25Q7Z3Z0 450 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
CELF4-223ENST00000603232 P2RX5Q93086 422 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 TUBGCP2Q9BSJ2 902 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 GBA2Q9HCG7 927 aaPredicted RBP17.12■□□□□ 0.33
CELF4-223ENST00000603232 LCMT1Q9UIC8 334 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 MAPK8IP1Q9UQF2 711 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 ABCB11O95342 1321 aa17.12■□□□□ 0.33
CELF4-223ENST00000603232 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
CELF4-223ENST00000603232 HNRNPH3P31942 346 aaKnown RBP17.11■□□□□ 0.33
CELF4-223ENST00000603232 SLC35G1Q2M3R5 365 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms