RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CKBP12277 381 aa20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 IKBKEQ14164 716 aa20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 MFSD10Q14728 455 aa20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 KIAA0753Q2KHM9 967 aa20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 CELF3Q5SZQ8 465 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 MYSM1Q5VVJ2 828 aa20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 STAG2Q8N3U4 1231 aa20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 HDAC6Q9UBN7 1215 aa20.67■□□□□ 0.9
SHKBP1-227ENST00000602011 CCND2P30279 289 aa20.66■□□□□ 0.9
SHKBP1-227ENST00000602011 CTAGE1Q96RT6 745 aa20.66■□□□□ 0.9
SHKBP1-227ENST00000602011 RAD9AQ99638 391 aa20.66■□□□□ 0.9
SHKBP1-227ENST00000602011 ZBED2Q9BTP6 218 aa20.66■□□□□ 0.9
SHKBP1-227ENST00000602011 EMSYQ7Z589 1322 aa20.66■□□□□ 0.9
SHKBP1-227ENST00000602011 TANC1Q9C0D5 1861 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 PNMA6FA0A0J9YX94 578 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 OPLAHO14841 1288 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 MYCLP12524 364 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 WDR5P61964 334 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 GRM4Q14833 912 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 GNPTABQ3T906 1256 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 EXOC6Q8TAG9 804 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 SPATA33Q96N06 139 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 PTPRSQ13332 1948 aa20.65■□□□□ 0.9
SHKBP1-227ENST00000602011 LCHNA4D1U4 455 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 IFIT3O14879 490 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 GPNMBQ14956 572 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 PGM5Q15124 567 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 RALYLQ86SE5 291 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 NCOA7Q8NI08 942 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 DHX38Q92620 1227 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 MAP3K14Q99558 947 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 ALG1Q9BT22 464 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 MTA3Q9BTC8 594 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 EPHX3Q9H6B9 360 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 MLXIPQ9HAP2 919 aa20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 TRIP12Q14669 1992 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-227ENST00000602011 CAND2O75155 1236 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 RGS20O76081 388 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 GJB5O95377 273 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 SMARCA1P28370 1054 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 GRB10Q13322 594 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 NEDD9Q14511 834 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 WTAPQ15007 396 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 TCTN1Q2MV58 587 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 TTC22Q5TAA0 569 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 XRRA1Q6P2D8 792 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 CYB5R4Q7L1T6 521 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 CATIPQ7Z7H3 387 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
SHKBP1-227ENST00000602011 PPP1R11O60927 126 aaPredicted RBP20.62■□□□□ 0.89
SHKBP1-227ENST00000602011 NBNO60934 754 aa20.62■□□□□ 0.89
SHKBP1-227ENST00000602011 GGPS1O95749 300 aa20.62■□□□□ 0.89
SHKBP1-227ENST00000602011 GNAT1P11488 350 aa20.62■□□□□ 0.89
SHKBP1-227ENST00000602011 PLA2G5P39877 138 aa20.62■□□□□ 0.89
SHKBP1-227ENST00000602011 TROAPQ12815 778 aa20.62■□□□□ 0.89
SHKBP1-227ENST00000602011 LPXNO60711 386 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 LGR5O75473 907 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 CYP21A2P08686 494 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 ICAM3P32942 547 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 DEFB103AP81534 67 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 TRIM71Q2Q1W2 868 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 HSDL1Q3SXM5 330 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 SERINC5Q86VE9 423 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 HOMER1Q86YM7 354 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 TMTC2Q8N394 836 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 GDPD5Q8WTR4 605 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 HLA-CQ95604 372 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 PIGSQ96S52 555 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 LZTS2Q9BRK4 669 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 INSL6Q9Y581 213 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 LAMA4Q16363 1823 aa20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 COL4A4P53420 1690 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-227ENST00000602011 H3BRB1 525 aa20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 HOXA13P31271 388 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 KIF5BP33176 963 aa20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 ERVK-21P61565 698 aa20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 ZNF618Q5T7W0 954 aa20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 KHSRPQ92945 711 aaKnown RBP eCLIP20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 FAM122AQ96E09 287 aa20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 TGS1Q96RS0 853 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 C16orf70Q9BSU1 422 aa20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 TUT1Q9H6E5 874 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-227ENST00000602011 KIAA1217Q5T5P2 1943 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 C17orf102A2RUQ5 167 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 RSPH10B2B2RC85 870 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 NOP56O00567 594 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 RSPH10BP0C881 870 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 ZNF286BP0CG31 522 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 UBA1P22314 1058 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 CHMLP26374 656 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 GNAQP50148 359 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 METTL7BQ6UX53 244 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 FCHSD1Q86WN1 690 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 GIMAP8Q8ND71 665 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 INPP4AQ96PE3 977 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 SENP7Q9BQF6 1050 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 C1QTNF1Q9BXJ1 281 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 MTUS1Q9ULD2 1270 aa20.59■□□□□ 0.89
SHKBP1-227ENST00000602011 BRWD1Q9NSI6 2320 aa20.58■□□□□ 0.89
SHKBP1-227ENST00000602011 SPATA31C2B4DYI2 1134 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms