RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 SP2Q02086 613 aa29.98■■■□□ 2.39
PNKP-216ENST00000601816 HEATR3Q7Z4Q2 680 aa29.98■■■□□ 2.39
PNKP-216ENST00000601816 KCNB2Q92953 911 aa29.98■■■□□ 2.39
PNKP-216ENST00000601816 SEMA6BQ9H3T3 888 aa29.98■■■□□ 2.39
PNKP-216ENST00000601816 MLXIPQ9HAP2 919 aa29.98■■■□□ 2.39
PNKP-216ENST00000601816 CNTNAP5Q8WYK1 1306 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 PPFIA4O75335 1185 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 ICAM3P32942 547 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 HSPA4P34932 840 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 FGD1P98174 961 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 PTGISQ16647 500 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 HSDL1Q3SXM5 330 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 PCNX4Q63HM2 1172 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 XRRA1Q6P2D8 792 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 RETREG2Q8NC44 543 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 RTEL1Q9NZ71 1219 aa29.97■■■□□ 2.39
PNKP-216ENST00000601816 TMEM265A0A087WTH1 108 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 KLF18A0A0U1RQI7 1052 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 PITPNM1O00562 1244 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 FIBPO43427 364 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 REC8O95072 547 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 DNAJB2P25686 324 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 BFSP2Q13515 415 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 MFSD10Q14728 455 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 GDF6Q6KF10 455 aaPredicted RBP29.96■■■□□ 2.39
PNKP-216ENST00000601816 OTOP2Q7RTS6 562 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 C7orf31Q8N865 590 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 JAKMIP1Q96N16 626 aaKnown RBP29.96■■■□□ 2.39
PNKP-216ENST00000601816 ALG1Q9BT22 464 aa29.96■■■□□ 2.39
PNKP-216ENST00000601816 TTYH1Q9H313 450 aaPredicted RBP29.96■■■□□ 2.39
PNKP-216ENST00000601816 GOLGA8AA7E2F4 631 aa29.95■■■□□ 2.39
PNKP-216ENST00000601816 GOLGA8BA8MQT2 603 aa29.95■■■□□ 2.39
PNKP-216ENST00000601816 SPATA31C2B4DYI2 1134 aa29.95■■■□□ 2.39
PNKP-216ENST00000601816 PFKMP08237 780 aa29.95■■■□□ 2.39
PNKP-216ENST00000601816 KIAA0753Q2KHM9 967 aa29.95■■■□□ 2.39
PNKP-216ENST00000601816 GTF2IRD1Q9UHL9 959 aa29.95■■■□□ 2.39
PNKP-216ENST00000601816 SNX14Q9Y5W7 946 aa29.95■■■□□ 2.39
PNKP-216ENST00000601816 MYH7BA7E2Y1 1941 aa29.94■■■□□ 2.38
PNKP-216ENST00000601816 HAS3O00219 553 aa29.94■■■□□ 2.38
PNKP-216ENST00000601816 RCAN1P53805 252 aa29.94■■■□□ 2.38
PNKP-216ENST00000601816 NEDD9Q14511 834 aa29.94■■■□□ 2.38
PNKP-216ENST00000601816 UBE2SQ16763 222 aa29.94■■■□□ 2.38
PNKP-216ENST00000601816 CCDC155Q8N6L0 562 aa29.94■■■□□ 2.38
PNKP-216ENST00000601816 CXXC1Q9P0U4 656 aaPredicted RBP29.94■■■□□ 2.38
PNKP-216ENST00000601816 HDAC6Q9UBN7 1215 aa29.94■■■□□ 2.38
PNKP-216ENST00000601816 NAP1L2Q9ULW6 460 aaPredicted RBP29.94■■■□□ 2.38
PNKP-216ENST00000601816 CPA1P15085 419 aa29.93■■■□□ 2.38
PNKP-216ENST00000601816 RFC2P35250 354 aa29.93■■■□□ 2.38
PNKP-216ENST00000601816 SEMA3FQ13275 785 aa29.93■■■□□ 2.38
PNKP-216ENST00000601816 BLOC1S2Q6QNY1 142 aa29.93■■■□□ 2.38
PNKP-216ENST00000601816 SPDYE3A6NKU9 549 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 GRXCR1A8MXD5 290 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 NOP56O00567 594 aaKnown RBP29.92■■■□□ 2.38
PNKP-216ENST00000601816 FUT2Q10981 343 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 WWC2Q6AWC2 1192 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 METTL7BQ6UX53 244 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 DEFB128Q7Z7B8 93 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 NLRX1Q86UT6 975 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 CAGE1Q8TC20 777 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 TIFAQ96CG3 184 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 VWCEQ96DN2 955 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 CTAGE1Q96RT6 745 aa29.92■■■□□ 2.38
PNKP-216ENST00000601816 CDX2Q99626 313 aaPredicted RBP29.92■■■□□ 2.38
PNKP-216ENST00000601816 IQCF3P0C7M6 154 aa29.91■■■□□ 2.38
PNKP-216ENST00000601816 Q6ZUG5 572 aa29.91■■■□□ 2.38
PNKP-216ENST00000601816 BCAS3Q9H6U6 928 aa29.91■■■□□ 2.38
PNKP-216ENST00000601816 NAPAP54920 295 aa29.9■■■□□ 2.38
PNKP-216ENST00000601816 PPP1R18Q6NYC8 613 aa29.9■■■□□ 2.38
PNKP-216ENST00000601816 CYFIP1Q7L576 1253 aa29.9■■■□□ 2.38
PNKP-216ENST00000601816 AFAP1L1Q8TED9 768 aa29.9■■■□□ 2.38
PNKP-216ENST00000601816 C16orf70Q9BSU1 422 aa29.9■■■□□ 2.38
PNKP-216ENST00000601816 PBX4Q9BYU1 374 aa29.9■■■□□ 2.38
PNKP-216ENST00000601816 V9GY48 417 aaPredicted RBP29.9■■■□□ 2.38
PNKP-216ENST00000601816 COL6A3P12111 3177 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 TANC1Q9C0D5 1861 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 ZBBXA8MT70 800 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 CDC27P30260 824 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 PBX2P40425 430 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 APOBRQ0VD83 1088 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 SENP7Q9BQF6 1050 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 EHMT1Q9H9B1 1298 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 FAM217BQ9NTX9 383 aaPredicted RBP29.89■■■□□ 2.38
PNKP-216ENST00000601816 PCDHA6Q9UN73 950 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 PCDHA8Q9Y5H6 950 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 SLC4A7Q9Y6M7 1214 aa29.89■■■□□ 2.38
PNKP-216ENST00000601816 LGALS2P05162 132 aa29.88■■■□□ 2.37
PNKP-216ENST00000601816 METAP2P50579 478 aaKnown RBP eCLIP29.88■■■□□ 2.37
PNKP-216ENST00000601816 RAB30Q15771 203 aa29.88■■■□□ 2.37
PNKP-216ENST00000601816 SLC17A8Q8NDX2 589 aa29.88■■■□□ 2.37
PNKP-216ENST00000601816 DHX38Q92620 1227 aaKnown RBP29.88■■■□□ 2.37
PNKP-216ENST00000601816 BRF1Q92994 677 aa29.88■■■□□ 2.37
PNKP-216ENST00000601816 GPRASP2Q96D09 838 aa29.88■■■□□ 2.37
PNKP-216ENST00000601816 CDHR1Q96JP9 859 aa29.88■■■□□ 2.37
PNKP-216ENST00000601816 CCDC196A0A1B0GTZ2 297 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 H3BRB1 525 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 hCG_1984214I3L0E3 225 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 ACTN1P12814 892 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 RPS6KB1P23443 525 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 PSMA5P28066 241 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 TYW1BQ6NUM6 668 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms