RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 DHX37Q8IY37 1157 aaKnown RBP19.74■□□□□ 0.75
HERC3-214ENST00000601319 IL17RAQ96F46 866 aa19.74■□□□□ 0.75
HERC3-214ENST00000601319 GLT8D2Q9H1C3 349 aa19.74■□□□□ 0.75
HERC3-214ENST00000601319 RIC8AQ9NPQ8 531 aa19.74■□□□□ 0.75
HERC3-214ENST00000601319 SPATA31C2B4DYI2 1134 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 B4GALT4O60513 344 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 GGPS1O95749 300 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 PDIA3P30101 505 aaKnown RBP19.73■□□□□ 0.75
HERC3-214ENST00000601319 ADCY7P51828 1080 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 FPGSQ05932 587 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 UBE2SQ16763 222 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 MFSD5Q6N075 450 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 EHMT1Q9H9B1 1298 aa19.73■□□□□ 0.75
HERC3-214ENST00000601319 ESYT2A0FGR8 921 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 F2P00734 622 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 SUPT20HL2P0C7V6 817 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 SCG2P13521 617 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 IFNAR1P17181 557 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 SP2Q02086 613 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 SEMA3FQ13275 785 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 NTRK3Q16288 839 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 NBPF20Q3BBV1 942 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 SESTD1Q86VW0 696 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 RNF26Q9BY78 433 aaPredicted RBP19.72■□□□□ 0.75
HERC3-214ENST00000601319 UPF3BQ9BZI7 483 aaKnown RBP19.72■□□□□ 0.75
HERC3-214ENST00000601319 TRPV6Q9H1D0 765 aa19.72■□□□□ 0.75
HERC3-214ENST00000601319 SOX1O00570 391 aaPredicted RBP19.71■□□□□ 0.75
HERC3-214ENST00000601319 PRPF3O43395 683 aaKnown RBP19.71■□□□□ 0.75
HERC3-214ENST00000601319 PPFIA4O75335 1185 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 FOSP01100 380 aaPredicted RBP19.71■□□□□ 0.75
HERC3-214ENST00000601319 AP3B2Q13367 1082 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 NEDD9Q14511 834 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 GPR153Q6NV75 609 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 NLRX1Q86UT6 975 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 KAT2BQ92831 832 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 GPRASP2Q96D09 838 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 ZNF274Q96GC6 653 aaPredicted RBP19.71■□□□□ 0.75
HERC3-214ENST00000601319 CDHR1Q96JP9 859 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 SPATA33Q96N06 139 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 SENP7Q9BQF6 1050 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 KATNAL1Q9BW62 490 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 PCDHA6Q9UN73 950 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 PCDHA8Q9Y5H6 950 aa19.71■□□□□ 0.75
HERC3-214ENST00000601319 SCN5AQ14524 2016 aa19.7■□□□□ 0.74
HERC3-214ENST00000601319 CLK2P49760 499 aaKnown RBP19.7■□□□□ 0.74
HERC3-214ENST00000601319 PKN1Q16512 942 aa19.7■□□□□ 0.74
HERC3-214ENST00000601319 HSDL1Q3SXM5 330 aa19.7■□□□□ 0.74
HERC3-214ENST00000601319 METTL7BQ6UX53 244 aa19.7■□□□□ 0.74
HERC3-214ENST00000601319 CCDC12Q8WUD4 166 aaPredicted RBP19.7■□□□□ 0.74
HERC3-214ENST00000601319 ZFP91Q96JP5 570 aaPredicted RBP19.7■□□□□ 0.74
HERC3-214ENST00000601319 NOC4LQ9BVI4 516 aaKnown RBP19.7■□□□□ 0.74
HERC3-214ENST00000601319 HIPK3Q9H422 1215 aa19.7■□□□□ 0.74
HERC3-214ENST00000601319 TRIP12Q14669 1992 aaPredicted RBP19.7■□□□□ 0.74
HERC3-214ENST00000601319 SMCO2A6NFE2 343 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 HAS3O00219 553 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 EPHB4P54760 987 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 PPIGQ13427 754 aaKnown RBP eCLIP19.69■□□□□ 0.74
HERC3-214ENST00000601319 SHHQ15465 462 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 FAM47CQ5HY64 1035 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 C9orf50Q5SZB4 431 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 MCTP2Q6DN12 878 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 TMEM199Q8N511 208 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 GIMAP8Q8ND71 665 aaPredicted RBP19.69■□□□□ 0.74
HERC3-214ENST00000601319 PPP1R12CQ9BZL4 782 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 ZMYND12Q9H0C1 365 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 MLXIPQ9HAP2 919 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 PDRG1Q9NUG6 133 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 TRMT13Q9NUP7 481 aaKnown RBP19.69■□□□□ 0.74
HERC3-214ENST00000601319 RTEL1Q9NZ71 1219 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 UBIAD1Q9Y5Z9 338 aa19.69■□□□□ 0.74
HERC3-214ENST00000601319 ZNF286BP0CG31 522 aa19.68■□□□□ 0.74
HERC3-214ENST00000601319 ITGB5P18084 799 aa19.68■□□□□ 0.74
HERC3-214ENST00000601319 SREBF1P36956 1147 aa19.68■□□□□ 0.74
HERC3-214ENST00000601319 PHKBQ93100 1093 aa19.68■□□□□ 0.74
HERC3-214ENST00000601319 ANO3Q9BYT9 981 aa19.68■□□□□ 0.74
HERC3-214ENST00000601319 NCOA5Q9HCD5 579 aaKnown RBP19.68■□□□□ 0.74
HERC3-214ENST00000601319 GBF1Q92538 1859 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 PITPNM1O00562 1244 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 MAFGO15525 162 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 PSEN2P49810 448 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 AKAP17AQ02040 695 aaKnown RBP19.67■□□□□ 0.74
HERC3-214ENST00000601319 MTMR1Q13613 665 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 MFSD10Q14728 455 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 CCDC148Q8NFR7 591 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 LRCH3Q96II8 777 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 WNT8AQ9H1J5 351 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 JADE2Q9NQC1 790 aa19.67■□□□□ 0.74
HERC3-214ENST00000601319 KAT6AQ92794 2004 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 NOP56O00567 594 aaKnown RBP19.66■□□□□ 0.74
HERC3-214ENST00000601319 CSF2RAP15509 400 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 KCNA2P16389 499 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 CYP2C18P33260 490 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 CCT2P78371 535 aaKnown RBP19.66■□□□□ 0.74
HERC3-214ENST00000601319 CYFIP1Q7L576 1253 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 TRIM22Q8IYM9 498 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 FAM177A1Q8N128 213 aaPredicted RBP19.66■□□□□ 0.74
HERC3-214ENST00000601319 GPR20Q99678 358 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 C16orf70Q9BSU1 422 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 SLC26A6Q9BXS9 759 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 C6orf50Q9HD87 102 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms