RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GRB10Q13322 594 aa24.6■■□□□ 1.53
PNKP-212ENST00000599454 STAG2Q8N3U4 1231 aa24.6■■□□□ 1.53
PNKP-212ENST00000599454 LMCD1Q9NZU5 365 aa24.6■■□□□ 1.53
PNKP-212ENST00000599454 PCDHA1Q9Y5I3 950 aa24.6■■□□□ 1.53
PNKP-212ENST00000599454 IGHDP01880 384 aa24.59■■□□□ 1.53
PNKP-212ENST00000599454 ZNF286BP0CG31 522 aa24.59■■□□□ 1.53
PNKP-212ENST00000599454 TGFB3P10600 412 aa24.59■■□□□ 1.53
PNKP-212ENST00000599454 KCNQ1P51787 676 aa24.59■■□□□ 1.53
PNKP-212ENST00000599454 SEC23AQ15436 765 aa24.59■■□□□ 1.53
PNKP-212ENST00000599454 MYSM1Q5VVJ2 828 aa24.59■■□□□ 1.53
PNKP-212ENST00000599454 PALM3A6NDB9 673 aaPredicted RBP24.58■■□□□ 1.53
PNKP-212ENST00000599454 LPXNO60711 386 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 GJB5O95377 273 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 MYCLP12524 364 aaPredicted RBP24.58■■□□□ 1.53
PNKP-212ENST00000599454 DEFB103AP81534 67 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 IKBKEQ14164 716 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 TRIM71Q2Q1W2 868 aaKnown RBP24.58■■□□□ 1.53
PNKP-212ENST00000599454 CELF3Q5SZQ8 465 aaKnown RBP24.58■■□□□ 1.53
PNKP-212ENST00000599454 KRT40Q6A162 431 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 VSIG10LQ86VR7 867 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 HLA-CQ95604 372 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 NECAB3Q96P71 396 aaPredicted RBP24.58■■□□□ 1.53
PNKP-212ENST00000599454 RAD9AQ99638 391 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 MAD2L2Q9UI95 211 aa24.58■■□□□ 1.53
PNKP-212ENST00000599454 EMSYQ7Z589 1322 aa24.58■■□□□ 1.52
PNKP-212ENST00000599454 RGS20O76081 388 aa24.57■■□□□ 1.52
PNKP-212ENST00000599454 PGM5Q15124 567 aa24.57■■□□□ 1.52
PNKP-212ENST00000599454 SPATA33Q96N06 139 aa24.57■■□□□ 1.52
PNKP-212ENST00000599454 C1QTNF1Q9BXJ1 281 aa24.57■■□□□ 1.52
PNKP-212ENST00000599454 LCHNA4D1U4 455 aa24.56■■□□□ 1.52
PNKP-212ENST00000599454 PPP1R11O60927 126 aaPredicted RBP24.56■■□□□ 1.52
PNKP-212ENST00000599454 TRDNQ13061 729 aa24.56■■□□□ 1.52
PNKP-212ENST00000599454 TRAF7Q6Q0C0 670 aa24.56■■□□□ 1.52
PNKP-212ENST00000599454 DOCK5Q9H7D0 1870 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 GCOM1H8Y6P7 765 aaPredicted RBP24.55■■□□□ 1.52
PNKP-212ENST00000599454 GGPS1O95749 300 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 POLR2MP0CAP2 368 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 CCND2P30279 289 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 ERVK-21P61565 698 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 HSDL1Q3SXM5 330 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 ZNF618Q5T7W0 954 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 TGS1Q96RS0 853 aaKnown RBP24.55■■□□□ 1.52
PNKP-212ENST00000599454 RIOX1Q9H6W3 641 aa24.55■■□□□ 1.52
PNKP-212ENST00000599454 LGR5O75473 907 aa24.54■■□□□ 1.52
PNKP-212ENST00000599454 UBA1P22314 1058 aaKnown RBP24.54■■□□□ 1.52
PNKP-212ENST00000599454 HOXA13P31271 388 aaPredicted RBP24.54■■□□□ 1.52
PNKP-212ENST00000599454 GRM4Q14833 912 aa24.54■■□□□ 1.52
PNKP-212ENST00000599454 CYB5R4Q7L1T6 521 aa24.54■■□□□ 1.52
PNKP-212ENST00000599454 SPRED2Q7Z698 418 aa24.54■■□□□ 1.52
PNKP-212ENST00000599454 TMCO2Q7Z6W1 182 aaPredicted RBP24.54■■□□□ 1.52
PNKP-212ENST00000599454 SERINC5Q86VE9 423 aa24.54■■□□□ 1.52
PNKP-212ENST00000599454 TCTN1Q2MV58 587 aa24.53■■□□□ 1.52
PNKP-212ENST00000599454 IL31RAQ8NI17 732 aa24.53■■□□□ 1.52
PNKP-212ENST00000599454 WNT8BQ93098 351 aa24.53■■□□□ 1.52
PNKP-212ENST00000599454 C16orf70Q9BSU1 422 aa24.53■■□□□ 1.52
PNKP-212ENST00000599454 MLXIPQ9HAP2 919 aa24.53■■□□□ 1.52
PNKP-212ENST00000599454 U3KPZ7 1027 aaPredicted RBP24.53■■□□□ 1.52
PNKP-212ENST00000599454 ERICH2A1L162 156 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 LINC01553A4QN01 128 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 STAM2O75886 525 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 ZNF200P98182 395 aaPredicted RBP24.52■■□□□ 1.52
PNKP-212ENST00000599454 MBTPS1Q14703 1052 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 HOMER1Q86YM7 354 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 GDPD5Q8WTR4 605 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 IL25Q9H293 177 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 SUGCTQ9HAC7 445 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 INSL6Q9Y581 213 aa24.52■■□□□ 1.52
PNKP-212ENST00000599454 NLRC5Q86WI3 1866 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 PNMA6FA0A0J9YX94 578 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 C17orf102A2RUQ5 167 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 RSPH10B2B2RC85 870 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 RSPH10BP0C881 870 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 SP2Q02086 613 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 GNPTABQ3T906 1256 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 PIGSQ96S52 555 aa24.51■■□□□ 1.51
PNKP-212ENST00000599454 H3BRB1 525 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 CAND2O75155 1236 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 AMHP03971 560 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 HOXC8P31273 242 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 THPOP40225 353 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 HIC1Q14526 733 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 SART3Q15020 963 aaKnown RBP24.5■■□□□ 1.51
PNKP-212ENST00000599454 FCHSD1Q86WN1 690 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 RUFY2Q8WXA3 655 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 TUT1Q9H6E5 874 aaKnown RBP24.5■■□□□ 1.51
PNKP-212ENST00000599454 FRMPD4Q14CM0 1322 aa24.5■■□□□ 1.51
PNKP-212ENST00000599454 IFIT3O14879 490 aaKnown RBP24.49■■□□□ 1.51
PNKP-212ENST00000599454 SORBS3O60504 671 aa24.49■■□□□ 1.51
PNKP-212ENST00000599454 ICAM3P32942 547 aa24.49■■□□□ 1.51
PNKP-212ENST00000599454 MKRN4PQ13434 485 aaPredicted RBP24.49■■□□□ 1.51
PNKP-212ENST00000599454 SLC35G1Q2M3R5 365 aa24.49■■□□□ 1.51
PNKP-212ENST00000599454 EXOC6Q8TAG9 804 aa24.49■■□□□ 1.51
PNKP-212ENST00000599454 ATP6V0A1Q93050 837 aa24.49■■□□□ 1.51
PNKP-212ENST00000599454 RALGAPA2Q2PPJ7 1873 aa24.49■■□□□ 1.51
PNKP-212ENST00000599454 NOP56O00567 594 aaKnown RBP24.48■■□□□ 1.51
PNKP-212ENST00000599454 CYTH3O43739 400 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 LGALS2P05162 132 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 CYP21A2P08686 494 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 NEDD9Q14511 834 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 WTAPQ15007 396 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms