RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 LSG1Q9H089 658 aaKnown RBP12.82□□□□□ -0.36
SCN8A-208ENST00000599343 M0R2C6 588 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 SPOPLQ6IQ16 392 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 CDC26Q8NHZ8 85 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 RPS6KC1Q96S38 1066 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 UBN1Q9NPG3 1134 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 PCDHA4Q9UN74 947 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 COL17A1Q9UMD9 1497 aaPredicted RBP12.82□□□□□ -0.36
SCN8A-208ENST00000599343 ABCC4O15439 1325 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 EIF3CLB5ME19 914 aaKnown RBP12.82□□□□□ -0.36
SCN8A-208ENST00000599343 PLS3P13797 630 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 CHRNDQ07001 517 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 RNF217Q8TC41 542 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 PI4K2BQ8TCG2 481 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 CACTINQ8WUQ7 758 aaKnown RBP12.82□□□□□ -0.36
SCN8A-208ENST00000599343 MAML1Q92585 1016 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 EIF3CQ99613 913 aaKnown RBP12.82□□□□□ -0.36
SCN8A-208ENST00000599343 ZNF577Q9BSK1 485 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 AKT3Q9Y243 479 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 INPP5FQ9Y2H2 1132 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 PHLPP2Q6ZVD8 1323 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 PPP6R2O75170 966 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 CSPG5O95196 566 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 THOC5Q13769 683 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 PARD6BQ9BYG5 372 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 DRC3Q9H069 523 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 SCOCQ9UIL1 159 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 SLC39A14Q15043 492 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 KCTD6Q8NC69 237 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 FBXO18Q8NFZ0 1043 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 THOC1Q96FV9 657 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 GSDMAQ96QA5 445 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 NHEJ1Q9H9Q4 299 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 UBE2TQ9NPD8 197 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 OLA1Q9NTK5 396 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 SLC5A4Q9NY91 659 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 A0A1W2PQ27 194 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 A0A1W2PQ64 194 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 A0A1W2PQD8 194 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 ART3Q13508 389 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 DEPDC1BQ8WUY9 529 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 XPAP23025 273 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 MRPS25P82663 173 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 KRT80Q6KB66 452 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 RSRC2Q7L4I2 434 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 CYTH2Q99418 400 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 TXLNGQ9NUQ3 528 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 TLK1Q9UKI8 766 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 EIF4A3P38919 411 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 PHKA1P46020 1223 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 KMT5AQ9NQR1 393 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 TLR7Q9NYK1 1049 aaKnown RBP12.81□□□□□ -0.36
SCN8A-208ENST00000599343 GCNT4Q9P109 453 aa12.81□□□□□ -0.36
SCN8A-208ENST00000599343 ABCB5Q2M3G0 1257 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 ZNF658Q5TYW1 1059 aaPredicted RBP12.8□□□□□ -0.36
SCN8A-208ENST00000599343 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 EEF1DP29692 281 aaKnown RBP12.8□□□□□ -0.36
SCN8A-208ENST00000599343 MAN2A1Q16706 1144 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 ZBTB33Q86T24 672 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 TRIM11Q96F44 468 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 MAGEF1Q9HAY2 307 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 EXOC1LA0A1B0GW35 172 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 TFDP1Q14186 410 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 Q3C1V9 767 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 ACCSQ96QU6 501 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
SCN8A-208ENST00000599343 JRKLQ9Y4A0 524 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 CDC25AP30304 524 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 SLC16A2P36021 539 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 TMEM259Q4ZIN3 620 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 PCGF5Q86SE9 256 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 EFHD1Q9BUP0 239 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 SNX25Q9H3E2 840 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 PCDHA13Q9Y5I0 950 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 LMTK3Q96Q04 1460 aa12.8□□□□□ -0.36
SCN8A-208ENST00000599343 GUCY2CP25092 1073 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 ZBTB17Q13105 803 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 E2F4Q16254 413 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 DNAJC24Q6P3W2 148 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 C7orf31Q8N865 590 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 HIPK4Q8NE63 616 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 N4BP2L2Q92802 583 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 EXT2Q93063 718 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 FOXP1Q9H334 677 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 ATP8B1O43520 1251 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 TNFAIP1Q13829 316 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 NXF1Q9UBU9 619 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms