RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 SPATA33Q96N06 139 aa26.51■■□□□ 1.83
SSBP4-205ENST00000598159 CDX2Q99626 313 aaPredicted RBP26.51■■□□□ 1.83
SSBP4-205ENST00000598159 TTYH1Q9H313 450 aaPredicted RBP26.51■■□□□ 1.83
SSBP4-205ENST00000598159 DNAJB2P25686 324 aa26.5■■□□□ 1.83
SSBP4-205ENST00000598159 RFC2P35250 354 aa26.5■■□□□ 1.83
SSBP4-205ENST00000598159 PSEN2P49810 448 aa26.5■■□□□ 1.83
SSBP4-205ENST00000598159 HSDL1Q3SXM5 330 aa26.5■■□□□ 1.83
SSBP4-205ENST00000598159 OTOP2Q7RTS6 562 aa26.5■■□□□ 1.83
SSBP4-205ENST00000598159 C7orf31Q8N865 590 aa26.5■■□□□ 1.83
SSBP4-205ENST00000598159 INPP4AQ96PE3 977 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-205ENST00000598159 SPATA31C2B4DYI2 1134 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 HAS3O00219 553 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 IQCF3P0C7M6 154 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 UBA1P22314 1058 aaKnown RBP26.49■■□□□ 1.83
SSBP4-205ENST00000598159 NEDD9Q14511 834 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 MFSD10Q14728 455 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 PCNX4Q63HM2 1172 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 GDF6Q6KF10 455 aaPredicted RBP26.49■■□□□ 1.83
SSBP4-205ENST00000598159 CCDC155Q8N6L0 562 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 KCNB2Q92953 911 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 RTEL1Q9NZ71 1219 aa26.49■■□□□ 1.83
SSBP4-205ENST00000598159 ZBTB43O43298 467 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 F2P00734 622 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 KIAA0753Q2KHM9 967 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 CAGE1Q8TC20 777 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 GPKOWQ92917 476 aaPredicted RBP eCLIP26.48■■□□□ 1.83
SSBP4-205ENST00000598159 TIFAQ96CG3 184 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 ALG1Q9BT22 464 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 CXXC1Q9P0U4 656 aaPredicted RBP26.48■■□□□ 1.83
SSBP4-205ENST00000598159 HDAC6Q9UBN7 1215 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 GTF2IRD1Q9UHL9 959 aa26.48■■□□□ 1.83
SSBP4-205ENST00000598159 FIBPO43427 364 aa26.47■■□□□ 1.83
SSBP4-205ENST00000598159 VWCEQ96DN2 955 aa26.47■■□□□ 1.83
SSBP4-205ENST00000598159 TCEANC2Q96MN5 208 aa26.47■■□□□ 1.83
SSBP4-205ENST00000598159 BRPF3Q9ULD4 1205 aa26.47■■□□□ 1.83
SSBP4-205ENST00000598159 TRIP12Q14669 1992 aaPredicted RBP26.47■■□□□ 1.83
SSBP4-205ENST00000598159 hCG_1642624A0A1W2PR95 340 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 GRXCR1A8MXD5 290 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 SORBS3O60504 671 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 NEFLP07196 543 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 ZNF286BP0CG31 522 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 RTN1Q16799 776 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 DEFB128Q7Z7B8 93 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 NLRX1Q86UT6 975 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 PBX4Q9BYU1 374 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 SLC4A7Q9Y6M7 1214 aa26.46■■□□□ 1.83
SSBP4-205ENST00000598159 ACTN1P12814 892 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 HSPA4P34932 840 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 RCAN1P53805 252 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 RAB30Q15771 203 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 METTL7BQ6UX53 244 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 AFAP1L1Q8TED9 768 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 CTAGE1Q96RT6 745 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 SENP7Q9BQF6 1050 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 ZNF576Q9H609 170 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 MSRAQ9UJ68 235 aa26.45■■□□□ 1.82
SSBP4-205ENST00000598159 REC8O95072 547 aa26.44■■□□□ 1.82
SSBP4-205ENST00000598159 FGD1P98174 961 aa26.44■■□□□ 1.82
SSBP4-205ENST00000598159 HEATR3Q7Z4Q2 680 aa26.44■■□□□ 1.82
SSBP4-205ENST00000598159 TEX2Q8IWB9 1127 aa26.44■■□□□ 1.82
SSBP4-205ENST00000598159 C16orf70Q9BSU1 422 aa26.44■■□□□ 1.82
SSBP4-205ENST00000598159 USP26Q9BXU7 913 aa26.44■■□□□ 1.82
SSBP4-205ENST00000598159 SCN5AQ14524 2016 aa26.43■■□□□ 1.82
SSBP4-205ENST00000598159 KLF18A0A0U1RQI7 1052 aa26.43■■□□□ 1.82
SSBP4-205ENST00000598159 SPDYE3A6NKU9 549 aa26.43■■□□□ 1.82
SSBP4-205ENST00000598159 NOP56O00567 594 aaKnown RBP26.43■■□□□ 1.82
SSBP4-205ENST00000598159 PARNO95453 639 aaKnown RBP26.43■■□□□ 1.82
SSBP4-205ENST00000598159 PBX2P40425 430 aa26.43■■□□□ 1.82
SSBP4-205ENST00000598159 SEMA3FQ13275 785 aa26.43■■□□□ 1.82
SSBP4-205ENST00000598159 CYFIP1Q7L576 1253 aa26.43■■□□□ 1.82
SSBP4-205ENST00000598159 GIMAP8Q8ND71 665 aaPredicted RBP26.43■■□□□ 1.82
SSBP4-205ENST00000598159 BCAS3Q9H6U6 928 aa26.43■■□□□ 1.82
SSBP4-205ENST00000598159 V9GY48 417 aaPredicted RBP26.43■■□□□ 1.82
SSBP4-205ENST00000598159 ZBBXA8MT70 800 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 H3BRB1 525 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 RBL2Q08999 1139 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 PTK7Q13308 1070 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 MYLIPQ8WY64 445 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 GPRASP2Q96D09 838 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 CDHR1Q96JP9 859 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 FTOQ9C0B1 505 aaKnown RBP eCLIP26.42■■□□□ 1.82
SSBP4-205ENST00000598159 TUT1Q9H6E5 874 aaKnown RBP26.42■■□□□ 1.82
SSBP4-205ENST00000598159 PCDHA6Q9UN73 950 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 PCDHA8Q9Y5H6 950 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 SNX14Q9Y5W7 946 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 COL6A3P12111 3177 aa26.42■■□□□ 1.82
SSBP4-205ENST00000598159 CNTNAP5Q8WYK1 1306 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 CCDC196A0A1B0GTZ2 297 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 GOLGA8AA7E2F4 631 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 GOLGA8BA8MQT2 603 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 hCG_1984214I3L0E3 225 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 SELPP16109 830 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 FUT2Q10981 343 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 GRIN2CQ14957 1233 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 UBE2SQ16763 222 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 BLOC1S2Q6QNY1 142 aa26.41■■□□□ 1.82
SSBP4-205ENST00000598159 ZNF713Q8N859 430 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-205ENST00000598159 DHX38Q92620 1227 aaKnown RBP26.41■■□□□ 1.82
SSBP4-205ENST00000598159 JAKMIP1Q96N16 626 aaKnown RBP26.41■■□□□ 1.82
SSBP4-205ENST00000598159 GPR20Q99678 358 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms