RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 MYBL2P10244 700 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 SEPT2Q15019 361 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 DUSP9Q99956 384 aaKnown RBP13.68□□□□□ -0.22
USHBP1-207ENST00000597928 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 THAP9Q9H5L6 903 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 PLA2G4BP0C869 781 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 PDCLQ13371 301 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 TTI2Q6NXR4 508 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 SH3RF1Q7Z6J0 888 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 CAPN11Q9UMQ6 739 aa13.68□□□□□ -0.22
USHBP1-207ENST00000597928 NDUFAB1O14561 156 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 HEXIM1O94992 359 aaKnown RBP13.67□□□□□ -0.22
USHBP1-207ENST00000597928 ACTN2P35609 894 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 KCNJ6P48051 423 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 KIAA0895Q8NCT3 520 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-207ENST00000597928 RASSF4Q9H2L5 321 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 MYO1AQ9UBC5 1043 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 RRP15Q9Y3B9 282 aaKnown RBP13.67□□□□□ -0.22
USHBP1-207ENST00000597928 GFPT2O94808 682 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
USHBP1-207ENST00000597928 PRR5LQ6MZQ0 368 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 DDX42Q86XP3 938 aaKnown RBP eCLIP13.67□□□□□ -0.22
USHBP1-207ENST00000597928 TRIM58Q8NG06 486 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
USHBP1-207ENST00000597928 BCAS3Q9H6U6 928 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 POLLQ9UGP5 575 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 MRC1P22897 1456 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 KRT14P02533 472 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 COPB2P35606 906 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 WDR59Q6PJI9 974 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 APTXQ7Z2E3 356 aaKnown RBP13.67□□□□□ -0.22
USHBP1-207ENST00000597928 LRRC15Q8TF66 581 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 DNM3Q9UQ16 869 aa13.67□□□□□ -0.22
USHBP1-207ENST00000597928 FAM237AA0A1B0GTK4 181 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 TOM1O60784 492 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 COASYQ13057 564 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 TICAM2Q86XR7 235 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 MRRFQ96E11 262 aaKnown RBP13.66□□□□□ -0.22
USHBP1-207ENST00000597928 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-207ENST00000597928 LEMD3Q9Y2U8 911 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 DAGLAQ9Y4D2 1042 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 SEMA3EO15041 775 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 SRGNP10124 158 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 PDHBP11177 359 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 USP14P54578 494 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 ADCY1Q08828 1119 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 CEP85LQ5SZL2 805 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-207ENST00000597928 DAAM2Q86T65 1068 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 OR2W6PQ8NHA6 318 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 FGFBP2Q9BYJ0 223 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
USHBP1-207ENST00000597928 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-207ENST00000597928 MYO1CO00159 1063 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 BUB1BO60566 1050 aaPredicted RBP13.66□□□□□ -0.22
USHBP1-207ENST00000597928 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 TTLL1O95922 423 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 SLC9A1P19634 815 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 ICA1Q05084 483 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 GRB10Q13322 594 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 CYP2W1Q8TAV3 490 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 ARHGAP20Q9P2F6 1191 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 COL4A3BPQ9Y5P4 624 aa13.66□□□□□ -0.22
USHBP1-207ENST00000597928 CHD2O14647 1828 aaKnown RBP13.65□□□□□ -0.22
USHBP1-207ENST00000597928 RSPH10B2B2RC85 870 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 RSPH10BP0C881 870 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 VPS41P49754 854 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 FKBP3Q00688 224 aaKnown RBP13.65□□□□□ -0.22
USHBP1-207ENST00000597928 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 OSBPL9Q96SU4 736 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 L1RE1Q9UN81 338 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
USHBP1-207ENST00000597928 EEF2P13639 858 aaKnown RBP13.65□□□□□ -0.22
USHBP1-207ENST00000597928 MCM3P25205 808 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 RPS6KA1Q15418 735 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 SFR1Q86XK3 245 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 RBM12Q9NTZ6 932 aaKnown RBP13.65□□□□□ -0.22
USHBP1-207ENST00000597928 MYH2Q9UKX2 1941 aa13.65□□□□□ -0.22
USHBP1-207ENST00000597928 ZBTB39O15060 712 aa13.65□□□□□ -0.23
USHBP1-207ENST00000597928 ZNF211Q13398 564 aaPredicted RBP13.65□□□□□ -0.23
USHBP1-207ENST00000597928 CFAP221Q4G0U5 840 aa13.65□□□□□ -0.23
USHBP1-207ENST00000597928 GPATCH11Q8N954 259 aa13.65□□□□□ -0.23
USHBP1-207ENST00000597928 SPATA4Q8NEY3 305 aa13.65□□□□□ -0.23
USHBP1-207ENST00000597928 NEDD1Q8NHV4 660 aa13.65□□□□□ -0.23
USHBP1-207ENST00000597928 CCDC127Q96BQ5 260 aa13.65□□□□□ -0.23
USHBP1-207ENST00000597928 EBAG9O00559 213 aa13.64□□□□□ -0.23
USHBP1-207ENST00000597928 PSMC6P62333 389 aa13.64□□□□□ -0.23
USHBP1-207ENST00000597928 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
USHBP1-207ENST00000597928 PEX26Q7Z412 305 aa13.64□□□□□ -0.23
USHBP1-207ENST00000597928 VPS36Q86VN1 386 aa13.64□□□□□ -0.23
USHBP1-207ENST00000597928 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms