RNA–Protein interactions for RNA: ENST00000597347.5

SOX2-OT-226, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,342 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-226ENST00000597347 SMARCC2Q8TAQ2 1214 aa11.2□□□□□ -0.62
SOX2-OT-226ENST00000597347 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
SOX2-OT-226ENST00000597347 BRF1Q92994 677 aa11.2□□□□□ -0.62
SOX2-OT-226ENST00000597347 GPRASP2Q96D09 838 aa11.2□□□□□ -0.62
SOX2-OT-226ENST00000597347 ZMYND12Q9H0C1 365 aa11.2□□□□□ -0.62
SOX2-OT-226ENST00000597347 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
SOX2-OT-226ENST00000597347 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 GOLGA8BA8MQT2 603 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 HAS3O00219 553 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 BEX3Q00994 111 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 AP3B2Q13367 1082 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 TOB2Q14106 344 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 PKN1Q16512 942 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 USP17L6PQ6QN14 398 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 SEPT14Q6ZU15 432 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 DHX37Q8IY37 1157 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 CCDC12Q8WUD4 166 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 EHMT1Q9H9B1 1298 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 TMEM39AQ9NV64 488 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 ZMYND8Q9ULU4 1186 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 CEP290O15078 2479 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 ALPK3Q96L96 1907 aa11.19□□□□□ -0.62
SOX2-OT-226ENST00000597347 STXBP3O00186 592 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 PARNO95453 639 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 MMP3P08254 477 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 CYP3A4P08684 503 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 SCG2P13521 617 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 RAG1P15918 1043 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 SYN1P17600 705 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 RXRAP19793 462 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 GNA11P29992 359 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 RBL2Q08999 1139 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 APOBRQ0VD83 1088 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 LY6KQ17RY6 165 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 WWC2Q6AWC2 1192 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 FAM109BQ6ICB4 259 aaPredicted RBP11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 GALNT17Q6IS24 598 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 METTL7BQ6UX53 244 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 CMTR1Q8N1G2 835 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 CRYGNQ8WXF5 182 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 TCEANC2Q96MN5 208 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 KATNAL1Q9BW62 490 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 UBE2OQ9C0C9 1292 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 DDX49Q9Y6V7 483 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-226ENST00000597347 SMCO2A6NFE2 343 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 SPDYE3A6NKU9 549 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 F2P00734 622 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 ITGB8P26012 769 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 HOXC8P31273 242 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 SP2Q02086 613 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 TMEM199Q8N511 208 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 BICD2Q8TD16 824 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 KAT2BQ92831 832 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 JADE2Q9NQC1 790 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 MCM3APO60318 1980 aa11.17□□□□□ -0.62
SOX2-OT-226ENST00000597347 MEIS1O00470 390 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 PQBP1O60828 265 aaKnown RBP11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 PFKMP08237 780 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 C7P10643 843 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 MYCLP12524 364 aaPredicted RBP11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 CPA1P15085 419 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 CIITAP33076 1130 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 RFC2P35250 354 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 SREBF1P36956 1147 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 SEMA3FQ13275 785 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 NBPF20Q3BBV1 942 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 RASIP1Q5U651 963 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 HEATR3Q7Z4Q2 680 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 IL31RAQ8NI17 732 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 COPS5Q92905 334 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 BADQ92934 168 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 C16orf70Q9BSU1 422 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 C22orf23Q9BZE7 217 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 C6orf50Q9HD87 102 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 PDRG1Q9NUG6 133 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 DNAH12Q6ZR08 3092 aa11.16□□□□□ -0.62
SOX2-OT-226ENST00000597347 B4GALT4O60513 344 aa11.15□□□□□ -0.62
SOX2-OT-226ENST00000597347 PFKFB2O60825 505 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms