RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 GRIN1Q05586 938 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 PGM5Q15124 567 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 SKOR2Q2VWA4 1001 aaPredicted RBP12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 PCNX4Q63HM2 1172 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 DTHD1Q6ZMT9 781 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 POTEDQ86YR6 584 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 DNERQ8NFT8 737 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 CYP2W1Q8TAV3 490 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 NSUN6Q8TEA1 469 aaKnown RBP12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 MXRA8Q9BRK3 442 aa12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 DDX49Q9Y6V7 483 aaKnown RBP12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
SH2D3A-206ENST00000597254 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 IGLV3-22A0A075B6J6 115 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 H0YGN5 161 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 NR3C2P08235 984 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 MYCLP12524 364 aaPredicted RBP12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 CYP2B6P20813 491 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 CMA1P23946 247 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 MRPS9P82933 396 aaKnown RBP12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 KCTD2Q14681 263 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 CALCRLQ16602 461 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 CEP55Q53EZ4 464 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 PRR16Q569H4 304 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 HABP4Q5JVS0 413 aaKnown RBP12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 SHC4Q6S5L8 630 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 VSIG10LQ86VR7 867 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 PLA2G4DQ86XP0 818 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 HAS1Q92839 578 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 LENG9Q96B70 501 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 IWS1Q96ST2 819 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 CSRNP2Q9H175 543 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 PAK6Q9NQU5 681 aaPredicted RBP12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 UBIAD1Q9Y5Z9 338 aa12.97□□□□□ -0.33
SH2D3A-206ENST00000597254 BRCA2P51587 3418 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 VWA3AA6NCI4 1184 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 MEIS1O00470 390 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 TBX3O15119 743 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 MARCH6O60337 910 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 MBD3O95983 291 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 PGK2P07205 417 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 XRCC5P13010 732 aaKnown RBP12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 CCND2P30279 289 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 TXKP42681 527 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 ALDH5A1P51649 535 aaPredicted RBP12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 XRRA1Q6P2D8 792 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 NIPA1Q7RTP0 329 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 GPR142Q7Z601 462 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 ABRAQ8N0Z2 381 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 KCNMB3Q9NPA1 279 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 JADE2Q9NQC1 790 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 ADD3Q9UEY8 706 aaKnown RBP12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
SH2D3A-206ENST00000597254 ASTN1O14525 1302 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 A0A1B0GVL5 298 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 MSH4O15457 936 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 COBLO75128 1261 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 ARP10275 920 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 ITGB5P18084 799 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 LIG1P18858 919 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 RGS2P41220 211 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 TECP42680 631 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 KLHL40Q2TBA0 621 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 RESP18Q5W5W9 173 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 ETNPPLQ8TBG4 499 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 MRPS27Q92552 414 aaKnown RBP12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 FGD4Q96M96 766 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 WDR11Q9BZH6 1224 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 GOLPH3LQ9H4A5 285 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 PCDHA12Q9UN75 941 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 LCTP09848 1927 aa12.95□□□□□ -0.34
SH2D3A-206ENST00000597254 TRIOBPQ9H2D6 2365 aa12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 FAM237AA0A1B0GTK4 181 aa12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 B4DLN1 442 aa12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 STAM2O75886 525 aa12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 ADORA2AP29274 412 aa12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 TRIM32Q13049 653 aa12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 GRB14Q14449 540 aa12.94□□□□□ -0.34
SH2D3A-206ENST00000597254 PDIA5Q14554 519 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms