RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-215	ENST00000596351	GTF2IRD1	Q9UHL9	959 aa		14	□□□□□ -0.17
LTBP4-215	ENST00000596351	PCDHA11	Q9Y5I1	949 aa		14	□□□□□ -0.17
LTBP4-215	ENST00000596351	MICAL3	Q7RTP6	2002 aa		14	□□□□□ -0.17
LTBP4-215	ENST00000596351	KAT6A	Q92794	2004 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	ARHGEF15	O94989	841 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	F2	P00734	622 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	CA3	P07451	260 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	CCND2	P30279	289 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	ZNF200	P98182	395 aa	Predicted RBP	13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	HIC1	Q14526	733 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	GPNMB	Q14956	572 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	KIAA0753	Q2KHM9	967 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	HSDL1	Q3SXM5	330 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	CELF3	Q5SZQ8	465 aa	Known RBP	13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	MYSM1	Q5VVJ2	828 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	ZNF654	Q8IZM8	581 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	C7orf31	Q8N865	590 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	WNT8B	Q93098	351 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	SPATA33	Q96N06	139 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	LSG1	Q9H089	658 aa	Known RBP	13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	CERS4	Q9HA82	394 aa		13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	MAP3K20	Q9NYL2	800 aa	Known RBP	13.99	□□□□□ -0.17
LTBP4-215	ENST00000596351	XIRP2	A4UGR9	3374 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	HAS3	O00219	553 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	RFXAP	O00287	272 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	PRC1	O43663	620 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	HOXD8	P13378	290 aa	Predicted RBP	13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	RXRA	P19793	462 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	TCTN1	Q2MV58	587 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	LRRC8D	Q7L1W4	858 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	RAB11FIP4	Q86YS3	637 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	CMTR1	Q8N1G2	835 aa	Known RBP	13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	CCDC155	Q8N6L0	562 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	CAGE1	Q8TC20	777 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	AFAP1L1	Q8TED9	768 aa		13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	TCF20	Q9UGU0	1960 aa	Known RBP	13.98	□□□□□ -0.17
LTBP4-215	ENST00000596351	BRWD1	Q9NSI6	2320 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	FRMPD4	Q14CM0	1322 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	EPOP	A6NHQ4	379 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	NBN	O60934	754 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	PLEKHA8P1	O95397	391 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	CKB	P12277	381 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	SELP	P16109	830 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	MRPS9	P82933	396 aa	Known RBP	13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	CASC1	Q6TDU7	716 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	SPRED2	Q7Z698	418 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	MICALL1	Q8N3F8	863 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	SAMD3	Q8N6K7	520 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	CTCFL	Q8NI51	663 aa	Predicted RBP	13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	SLC9A7	Q96T83	725 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	ESYT1	Q9BSJ8	1104 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	KATNAL1	Q9BW62	490 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	TELO2	Q9Y4R8	837 aa		13.97	□□□□□ -0.17
LTBP4-215	ENST00000596351	SH2B2	O14492	632 aa	Predicted RBP	13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	SLC27A2	O14975	620 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	DDAH1	O94760	285 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	WDR5	P61964	334 aa	Known RBP	13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	DEFB103A	P81534	67 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	RBL2	Q08999	1139 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	TRAF1	Q13077	416 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	SEMA3F	Q13275	785 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	TRIM71	Q2Q1W2	868 aa	Known RBP	13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	KCNV1	Q6PIU1	500 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	TRAF7	Q6Q0C0	670 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	USP17L6P	Q6QN14	398 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	NFXL1	Q6ZNB6	911 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	HERC6	Q8IVU3	1022 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	RRP36	Q96EU6	259 aa	Known RBP	13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	C16orf70	Q9BSU1	422 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	SPZ1	Q9BXG8	430 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	LRRC2	Q9BYS8	371 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	MLXIP	Q9HAP2	919 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	RTEL1	Q9NZ71	1219 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	SI	P14410	1827 aa		13.96	□□□□□ -0.17
LTBP4-215	ENST00000596351	hCG_1642624	A0A1W2PR95	340 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	PPFIA4	O75335	1185 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	BAIAP3	O94812	1187 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	KIF5B	P33176	963 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	MCM5	P33992	734 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	PTK7	Q13308	1070 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	MBTPS1	Q14703	1052 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	TJAP1	Q5JTD0	557 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	ZNF618	Q5T7W0	954 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	SRBD1	Q8N5C6	995 aa	Known RBP	13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	INPP4A	Q96PE3	977 aa	Predicted RBP	13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	ANO2	Q9NQ90	1003 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	THEG	Q9P2T0	379 aa		13.95	□□□□□ -0.18
LTBP4-215	ENST00000596351	LCHN	A4D1U4	455 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	CCDC69	A6NI79	296 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	MEIS2	O14770	477 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	CXCL10	P02778	98 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	LGALS2	P05162	132 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	TGFB3	P10600	412 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	KCNJ6	P48051	423 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	SP4	Q02446	784 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	TAP1	Q03518	808 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	CREB3L3	Q68CJ9	461 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	KRT40	Q6A162	431 aa		13.94	□□□□□ -0.18
LTBP4-215	ENST00000596351	CNKSR3	Q6P9H4	555 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms