RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ZSCAN22P10073 491 aaPredicted RBP25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 ARP10275 920 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 TGFB3P10600 412 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 CCL5P13501 91 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 AKR1A1P14550 325 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 SMPD1P17405 629 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 SP2Q02086 613 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 PRR16Q569H4 304 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 BRAPQ7Z569 592 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 PAK6Q9NQU5 681 aaPredicted RBP25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 MRVI1Q9Y6F6 885 aa25.62■■□□□ 1.69
SNRNP70-204ENST00000595231 TXNP10599 105 aaKnown RBP25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 PTGS1P23219 599 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 TRAPPC10P48553 1259 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 TNFAIP2Q03169 654 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 TTLL4Q14679 1199 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 LY6KQ17RY6 165 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 Q4G0T1 1027 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 KCNV1Q6PIU1 500 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 PLA2G4DQ86XP0 818 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 IPO9Q96P70 1041 aaKnown RBP25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.61■■□□□ 1.695e-12■■■□□ 17.1
SNRNP70-204ENST00000595231 GNEQ9Y223 722 aaKnown RBP25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 ATP9AO75110 1047 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 BRD1O95696 1058 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 ATP2B1P20020 1258 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 DUSP28Q4G0W2 176 aa25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 GJC2Q5T442 439 aaPredicted RBP25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 LENG1Q96BZ8 264 aaPredicted RBP25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 ZSCAN16Q9H4T2 348 aaPredicted RBP25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 DDX20Q9UHI6 824 aaKnown RBP25.61■■□□□ 1.69
SNRNP70-204ENST00000595231 SLC37A4O43826 429 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 GCFC2P16383 781 aaKnown RBP25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 NBR1Q14596 966 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 FOXD4L5Q5VV16 416 aaPredicted RBP25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 MYSM1Q5VVJ2 828 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 ANO1Q5XXA6 986 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 LHX8Q68G74 356 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 FOXD4L4Q8WXT5 416 aaPredicted RBP25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 CDHR1Q96JP9 859 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 RNF208Q9H0X6 261 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 BCAS3Q9H6U6 928 aa25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 DDX25Q9UHL0 483 aaKnown RBP25.6■■□□□ 1.69
SNRNP70-204ENST00000595231 POTEFA5A3E0 1075 aa25.59■■□□□ 1.69
SNRNP70-204ENST00000595231 SETQ01105 290 aaPredicted RBP25.59■■□□□ 1.69
SNRNP70-204ENST00000595231 RILPL1Q5EBL4 403 aa25.59■■□□□ 1.69
SNRNP70-204ENST00000595231 COPS5Q92905 334 aa25.59■■□□□ 1.69
SNRNP70-204ENST00000595231 NAP1L4Q99733 375 aaKnown RBP25.59■■□□□ 1.69
SNRNP70-204ENST00000595231 AGO4Q9HCK5 861 aaKnown RBP25.59■■□□□ 1.69
SNRNP70-204ENST00000595231 NOL7Q9UMY1 257 aaKnown RBP25.59■■□□□ 1.69
SNRNP70-204ENST00000595231 F13A1P00488 732 aa25.58■■□□□ 1.69
SNRNP70-204ENST00000595231 KCNA2P16389 499 aa25.58■■□□□ 1.69
SNRNP70-204ENST00000595231 TTC38Q5R3I4 469 aa25.58■■□□□ 1.69
SNRNP70-204ENST00000595231 FAM173BQ6P4H8 233 aa25.58■■□□□ 1.69
SNRNP70-204ENST00000595231 SENP7Q9BQF6 1050 aa25.58■■□□□ 1.69
SNRNP70-204ENST00000595231 PCDHB6Q9Y5E3 794 aa25.58■■□□□ 1.69
SNRNP70-204ENST00000595231 MSH4O15457 936 aa25.58■■□□□ 1.68
SNRNP70-204ENST00000595231 DUSP11O75319 330 aaKnown RBP25.58■■□□□ 1.68
SNRNP70-204ENST00000595231 UBA1P22314 1058 aaKnown RBP25.58■■□□□ 1.68
SNRNP70-204ENST00000595231 MSCO60682 206 aa25.57■■□□□ 1.68
SNRNP70-204ENST00000595231 ZNF174Q15697 407 aa25.57■■□□□ 1.68
SNRNP70-204ENST00000595231 UIMC1Q96RL1 719 aa25.57■■□□□ 1.68
SNRNP70-204ENST00000595231 NKRFO15226 690 aaKnown RBP eCLIP25.56■■□□□ 1.682e-18■■□□□ 13.7
SNRNP70-204ENST00000595231 RARBP10826 455 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 MCM7P33993 719 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 ITGB3BPQ13352 177 aaPredicted RBP25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 POTEDQ86YR6 584 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 ETNPPLQ8TBG4 499 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 DEFB118Q96PH6 123 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 KCNMB3Q9NPA1 279 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 PKD2L1Q9P0L9 805 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 Q9Y3F1 56 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 DOCK5Q9H7D0 1870 aa25.56■■□□□ 1.68
SNRNP70-204ENST00000595231 IPO5O00410 1097 aaKnown RBP25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 DHX15O43143 795 aaKnown RBP25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 ARHGAP1Q07960 439 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 CELF3Q5SZQ8 465 aaKnown RBP25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 HAS1Q92839 578 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 GJA10Q969M2 543 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 ZNF577Q9BSK1 485 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 GGPS1O95749 300 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 GJB1P08034 283 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 ORC2Q13416 577 aaPredicted RBP25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 NEDD9Q14511 834 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 SLC5A5Q92911 643 aa25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.55■■□□□ 1.68
SNRNP70-204ENST00000595231 FRMPD3Q5JV73 1810 aa25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 DYNC1LI2O43237 492 aaPredicted RBP25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 NEMFO60524 1076 aa25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 IRX5P78411 483 aaPredicted RBP25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 CYFIP1Q7L576 1253 aa25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 TLK2Q86UE8 772 aa25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 C4orf32Q8N8J7 132 aa25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 EMID1Q96A84 441 aaPredicted RBP25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 MTMR9Q96QG7 549 aa25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 TMEM60Q9H2L4 133 aa25.54■■□□□ 1.68
SNRNP70-204ENST00000595231 CTAGE5O15320 804 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 SORBS3O60504 671 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 FARP2O94887 1054 aaPredicted RBP25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 GH1P01241 217 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms