RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 TBX3O15119 743 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 RGS19P49795 217 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 SLC39A14Q15043 492 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 PTPAQ15257 358 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 CCL14Q16627 93 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 FBXO16Q8IX29 292 aaPredicted RBP12.28□□□□□ -0.44
USE1-204ENST00000594399 LINC00301Q8NCQ3 95 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 CYP2W1Q8TAV3 490 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 RAET1EQ8TD07 263 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 KCNG4Q8TDN1 519 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 LEO1Q8WVC0 666 aaPredicted RBP12.28□□□□□ -0.44
USE1-204ENST00000594399 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 SPATA32Q96LK8 384 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 TMEM60Q9H2L4 133 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 KCNMB3Q9NPA1 279 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 FLRT1Q9NZU1 646 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 PTPN22Q9Y2R2 807 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 MORC2Q9Y6X9 1032 aaPredicted RBP12.28□□□□□ -0.44
USE1-204ENST00000594399 KIAA1217Q5T5P2 1943 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 DOCK3Q8IZD9 2030 aa12.28□□□□□ -0.44
USE1-204ENST00000594399 MCM3APO60318 1980 aa12.27□□□□□ -0.44
USE1-204ENST00000594399 SPTLC2O15270 562 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 MSH4O15457 936 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 MAFGO15525 162 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 MARCH6O60337 910 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 RGS20O76081 388 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 ICAM3P32942 547 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 PRPHP41219 470 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
USE1-204ENST00000594399 CSPP1Q1MSJ5 1256 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 ARL6IP4Q66PJ3 421 aaKnown RBP12.27□□□□□ -0.45
USE1-204ENST00000594399 EEPD1Q7L9B9 569 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 C4orf32Q8N8J7 132 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 ETNPPLQ8TBG4 499 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 TRIB2Q92519 343 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 FAM20AQ96MK3 541 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 ZNF577Q9BSK1 485 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 KATNBL1Q9H079 304 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 KCNH7Q9NS40 1196 aa12.27□□□□□ -0.45
USE1-204ENST00000594399 ZHX1Q9UKY1 873 aaPredicted RBP12.27□□□□□ -0.45
USE1-204ENST00000594399 PPP6R2O75170 966 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 SNAI1O95863 264 aaPredicted RBP12.26□□□□□ -0.45
USE1-204ENST00000594399 IGHA2P01877 340 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 ARP10275 920 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 MARCKSP29966 332 aaPredicted RBP12.26□□□□□ -0.45
USE1-204ENST00000594399 CYP2C19P33261 490 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 SEMA3FQ13275 785 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 TMEM266Q2M3C6 531 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 MFSD14CQ5VZR4 134 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 KCNV1Q6PIU1 500 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 SEPT14Q6ZU15 432 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 SCFD2Q8WU76 684 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 HAS1Q92839 578 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 SLC5A5Q92911 643 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 MTMR9Q96QG7 549 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 GDPD2Q9HCC8 539 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 AGO4Q9HCK5 861 aaKnown RBP12.26□□□□□ -0.45
USE1-204ENST00000594399 RCOR1Q9UKL0 485 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 MRVI1Q9Y6F6 885 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 ELP1O95163 1332 aa12.26□□□□□ -0.45
USE1-204ENST00000594399 TCHHQ07283 1943 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 SPATA31C2B4DYI2 1134 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 IPO5O00410 1097 aaKnown RBP12.25□□□□□ -0.45
USE1-204ENST00000594399 ADCY3O60266 1144 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 HMGCRP04035 888 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 TGFB3P10600 412 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 ME1P48163 572 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 SOX10P56693 466 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 TTLL4Q14679 1199 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 LRCH2Q5VUJ6 765 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 DTHD1Q6ZMT9 781 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 KRI1Q8N9T8 703 aaKnown RBP12.25□□□□□ -0.45
USE1-204ENST00000594399 TMEM87AQ8NBN3 555 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 RIT2Q99578 217 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 SDF4Q9BRK5 362 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 TEKT3Q9BXF9 490 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 PKD2L1Q9P0L9 805 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 TCEAL9Q9UHQ7 104 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 NRBP1Q9UHY1 535 aa12.25□□□□□ -0.45
USE1-204ENST00000594399 FBXO2Q9UK22 296 aaPredicted RBP12.25□□□□□ -0.45
USE1-204ENST00000594399 RBM47A0AV96 593 aaKnown RBP12.24□□□□□ -0.45
USE1-204ENST00000594399 VWA3AA6NCI4 1184 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 GAS7O60861 476 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 NFASCO94856 1347 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 ELNP15502 786 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 KCNA2P16389 499 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 UBA1P22314 1058 aaKnown RBP12.24□□□□□ -0.45
USE1-204ENST00000594399 TXKP42681 527 aa12.24□□□□□ -0.45
USE1-204ENST00000594399 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
USE1-204ENST00000594399 ITGB3BPQ13352 177 aaPredicted RBP12.24□□□□□ -0.45
USE1-204ENST00000594399 KIAA0100Q14667 2235 aaKnown RBP12.24□□□□□ -0.45
USE1-204ENST00000594399 TAPT1Q6NXT6 567 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms