RNA–Protein interactions for RNA: ENST00000594087.1

CCDC61-202, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC61, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-202ENST00000594087 ITGB8P26012 769 aa20.33■□□□□ 0.85
CCDC61-202ENST00000594087 AKAP17AQ02040 695 aaKnown RBP20.33■□□□□ 0.85
CCDC61-202ENST00000594087 PFKFB3Q16875 520 aaPredicted RBP20.33■□□□□ 0.85
CCDC61-202ENST00000594087 NBPF20Q3BBV1 942 aa20.33■□□□□ 0.85
CCDC61-202ENST00000594087 GIMAP8Q8ND71 665 aaPredicted RBP20.33■□□□□ 0.85
CCDC61-202ENST00000594087 CCDC12Q8WUD4 166 aaPredicted RBP20.33■□□□□ 0.85
CCDC61-202ENST00000594087 SENP7Q9BQF6 1050 aa20.33■□□□□ 0.85
CCDC61-202ENST00000594087 MAFGO15525 162 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 PRPF3O43395 683 aaKnown RBP20.32■□□□□ 0.84
CCDC61-202ENST00000594087 B4GALT4O60513 344 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 SCG2P13521 617 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 UBA1P22314 1058 aaKnown RBP20.32■□□□□ 0.84
CCDC61-202ENST00000594087 PDIA3P30101 505 aaKnown RBP20.32■□□□□ 0.84
CCDC61-202ENST00000594087 ADCY7P51828 1080 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 PPIGQ13427 754 aaKnown RBP eCLIP20.32■□□□□ 0.843e-6■■■■□ 22.6
CCDC61-202ENST00000594087 MCTP2Q6DN12 878 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 ZNF274Q96GC6 653 aaPredicted RBP20.32■□□□□ 0.84
CCDC61-202ENST00000594087 SPATA33Q96N06 139 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 HIPK3Q9H422 1215 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 PCDHA6Q9UN73 950 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 PCDHA8Q9Y5H6 950 aa20.32■□□□□ 0.84
CCDC61-202ENST00000594087 SMCO2A6NFE2 343 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 STXBP3O00186 592 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 HOXD8P13378 290 aaPredicted RBP20.31■□□□□ 0.84
CCDC61-202ENST00000594087 AP3B2Q13367 1082 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 FAM47CQ5HY64 1035 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 METTL7BQ6UX53 244 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 SESTD1Q86VW0 696 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 GPRASP2Q96D09 838 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 RNF26Q9BY78 433 aaPredicted RBP20.31■□□□□ 0.84
CCDC61-202ENST00000594087 TRPV6Q9H1D0 765 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 RTEL1Q9NZ71 1219 aa20.31■□□□□ 0.84
CCDC61-202ENST00000594087 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
CCDC61-202ENST00000594087 IFNAR1P17181 557 aa20.3■□□□□ 0.84
CCDC61-202ENST00000594087 SP2Q02086 613 aa20.3■□□□□ 0.84
CCDC61-202ENST00000594087 TOB2Q14106 344 aaPredicted RBP20.3■□□□□ 0.84
CCDC61-202ENST00000594087 UBE2SQ16763 222 aa20.3■□□□□ 0.84
CCDC61-202ENST00000594087 UPF3BQ9BZI7 483 aaKnown RBP20.3■□□□□ 0.84
CCDC61-202ENST00000594087 PDRG1Q9NUG6 133 aa20.3■□□□□ 0.84
CCDC61-202ENST00000594087 ESYT2A0FGR8 921 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 NOP56O00567 594 aaKnown RBP20.29■□□□□ 0.84
CCDC61-202ENST00000594087 F2P00734 622 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 GNA11P29992 359 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 SHHQ15465 462 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 HSDL1Q3SXM5 330 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 TYW1BQ6NUM6 668 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 CPLX2Q6PUV4 134 aaKnown RBP20.29■□□□□ 0.84
CCDC61-202ENST00000594087 TRIM22Q8IYM9 498 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 ZFP91Q96JP5 570 aaPredicted RBP20.29■□□□□ 0.84
CCDC61-202ENST00000594087 PPP1R12CQ9BZL4 782 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 C6orf50Q9HD87 102 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 PCDH10Q9P2E7 1040 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 NOD1Q9Y239 953 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 LAMA3Q16787 3333 aa20.29■□□□□ 0.84
CCDC61-202ENST00000594087 ANKRD1Q15327 319 aa20.28■□□□□ 0.84
CCDC61-202ENST00000594087 NTRK3Q16288 839 aa20.28■□□□□ 0.84
CCDC61-202ENST00000594087 C7orf31Q8N865 590 aa20.28■□□□□ 0.84
CCDC61-202ENST00000594087 KAT2BQ92831 832 aa20.28■□□□□ 0.84
CCDC61-202ENST00000594087 NOC4LQ9BVI4 516 aaKnown RBP20.28■□□□□ 0.84
CCDC61-202ENST00000594087 ZMYND12Q9H0C1 365 aa20.28■□□□□ 0.84
CCDC61-202ENST00000594087 TRMT13Q9NUP7 481 aaKnown RBP20.28■□□□□ 0.84
CCDC61-202ENST00000594087 CPLX1O14810 134 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 PSEN2P49810 448 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 CHMP4BP1P59074 171 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 CCT2P78371 535 aaKnown RBP20.27■□□□□ 0.84
CCDC61-202ENST00000594087 MTMR1Q13613 665 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 PSRC1Q6PGN9 363 aaPredicted RBP20.27■□□□□ 0.84
CCDC61-202ENST00000594087 RPUSD2Q8IZ73 545 aaKnown RBP20.27■□□□□ 0.84
CCDC61-202ENST00000594087 CCDC148Q8NFR7 591 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 BICD2Q8TD16 824 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 JADE2Q9NQC1 790 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 UBIAD1Q9Y5Z9 338 aa20.27■□□□□ 0.84
CCDC61-202ENST00000594087 HAS3O00219 553 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 PITPNM1O00562 1244 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 SOX1O00570 391 aaPredicted RBP20.26■□□□□ 0.83
CCDC61-202ENST00000594087 CSF2RAP15509 400 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 ITGB5P18084 799 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 CYP2C18P33260 490 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 CLK2P49760 499 aaKnown RBP20.26■□□□□ 0.83
CCDC61-202ENST00000594087 SEMA3FQ13275 785 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 BFSP2Q13515 415 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 MFSD10Q14728 455 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 PKN1Q16512 942 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 KIAA0753Q2KHM9 967 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 C9orf50Q5SZB4 431 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 CYFIP1Q7L576 1253 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 CCDC155Q8N6L0 562 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 PHKBQ93100 1093 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 IL17RAQ96F46 866 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 LRCH3Q96II8 777 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 RNPC3Q96LT9 517 aaKnown RBP20.26■□□□□ 0.83
CCDC61-202ENST00000594087 SLC26A6Q9BXS9 759 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 ANO3Q9BYT9 981 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 MTIF3Q9H2K0 278 aaKnown RBP20.26■□□□□ 0.83
CCDC61-202ENST00000594087 SH3GLB2Q9NR46 395 aa20.26■□□□□ 0.83
CCDC61-202ENST00000594087 PFKMP08237 780 aa20.25■□□□□ 0.83
CCDC61-202ENST00000594087 PTGISQ16647 500 aa20.25■□□□□ 0.83
CCDC61-202ENST00000594087 FAM177A1Q8N128 213 aaPredicted RBP20.25■□□□□ 0.83
CCDC61-202ENST00000594087 RETREG2Q8NC44 543 aa20.25■□□□□ 0.83
CCDC61-202ENST00000594087 CAGE1Q8TC20 777 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms