RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 STAG2Q8N3U4 1231 aa17.12■□□□□ 0.33
PNKP-202ENST00000593706 COG5Q9UP83 839 aa17.12■□□□□ 0.33
PNKP-202ENST00000593706 ATG2AQ2TAZ0 1938 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 LCHNA4D1U4 455 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 SORBS3O60504 671 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 PTK7Q13308 1070 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 GDPD5Q8WTR4 605 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 LOXHD1Q8IVV2 1947 aa17.11■□□□□ 0.33
PNKP-202ENST00000593706 ABHD14A-ACY1A0A1B0GW23 586 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 OPLAHO14841 1288 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 ZBTB5O15062 677 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 NBNO60934 754 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 EFCAB14O75071 495 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 GGPS1O95749 300 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 CXCL10P02778 98 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 HOXA13P31271 388 aaPredicted RBP17.1■□□□□ 0.33
PNKP-202ENST00000593706 TRDNQ13061 729 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 IKBKEQ14164 716 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 HLA-CQ95604 372 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 PCDHA1Q9Y5I3 950 aa17.1■□□□□ 0.33
PNKP-202ENST00000593706 PPP1R11O60927 126 aaPredicted RBP17.09■□□□□ 0.33
PNKP-202ENST00000593706 GJB5O95377 273 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 CHMLP26374 656 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 GPNMBQ14956 572 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 PGM5Q15124 567 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 ZNF618Q5T7W0 954 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 FAM117BQ6P1L5 589 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
PNKP-202ENST00000593706 RAPGEFL1Q9UHV5 662 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 MAD2L2Q9UI95 211 aa17.09■□□□□ 0.33
PNKP-202ENST00000593706 EMSYQ7Z589 1322 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 HAS3O00219 553 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 UBA1P22314 1058 aaKnown RBP17.08■□□□□ 0.32
PNKP-202ENST00000593706 CCND2P30279 289 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 GHRHRQ02643 423 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 TRAF1Q13077 416 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 SEC23AQ15436 765 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 HSDL1Q3SXM5 330 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 CELF3Q5SZQ8 465 aaKnown RBP17.08■□□□□ 0.32
PNKP-202ENST00000593706 STOX1Q6ZVD7 989 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 CYB5R4Q7L1T6 521 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 IL31RAQ8NI17 732 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 RAD9AQ99638 391 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 C5orf42Q9H799 3197 aa17.08■□□□□ 0.32
PNKP-202ENST00000593706 ERICH2A1L162 156 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 LPXNO60711 386 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 PPFIA4O75335 1185 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 RGS20O76081 388 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 HOXD8P13378 290 aaPredicted RBP17.07■□□□□ 0.32
PNKP-202ENST00000593706 ZNF200P98182 395 aaPredicted RBP17.07■□□□□ 0.32
PNKP-202ENST00000593706 TCTN1Q2MV58 587 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 FCHSD1Q86WN1 690 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 WNT8BQ93098 351 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 MTMR8Q96EF0 704 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 TGS1Q96RS0 853 aaKnown RBP17.07■□□□□ 0.32
PNKP-202ENST00000593706 C1QTNF1Q9BXJ1 281 aa17.07■□□□□ 0.32
PNKP-202ENST00000593706 PALM3A6NDB9 673 aaPredicted RBP17.06■□□□□ 0.32
PNKP-202ENST00000593706 GCOM1H8Y6P7 765 aaPredicted RBP17.06■□□□□ 0.32
PNKP-202ENST00000593706 NOP56O00567 594 aaKnown RBP17.06■□□□□ 0.32
PNKP-202ENST00000593706 LGR5O75473 907 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 POLR2MP0CAP2 368 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 THPOP40225 353 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 MBTPS1Q14703 1052 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 GRM4Q14833 912 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 TRIM71Q2Q1W2 868 aaKnown RBP17.06■□□□□ 0.32
PNKP-202ENST00000593706 GNPTABQ3T906 1256 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 RALYLQ86SE5 291 aaKnown RBP17.06■□□□□ 0.32
PNKP-202ENST00000593706 VSIG10LQ86VR7 867 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 SAMD3Q8N6K7 520 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 ZFP91Q96JP5 570 aaPredicted RBP17.06■□□□□ 0.32
PNKP-202ENST00000593706 PIGSQ96S52 555 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 LMCD1Q9NZU5 365 aa17.06■□□□□ 0.32
PNKP-202ENST00000593706 C17orf102A2RUQ5 167 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 LINC01553A4QN01 128 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 IFIT3O14879 490 aaKnown RBP17.05■□□□□ 0.32
PNKP-202ENST00000593706 AMHP03971 560 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 TGFB3P10600 412 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 SART3Q15020 963 aaKnown RBP17.05■□□□□ 0.32
PNKP-202ENST00000593706 TRAF7Q6Q0C0 670 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 SERINC5Q86VE9 423 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 MYOCDQ8IZQ8 938 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 ATP6V0A1Q93050 837 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 KIAA1671Q9BY89 1806 aa17.05■□□□□ 0.32
PNKP-202ENST00000593706 MYO7AQ13402 2215 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 RSPH10B2B2RC85 870 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 H3BRB1 525 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 SGSM2O43147 1006 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 LGALS2P05162 132 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 RSPH10BP0C881 870 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 ERVK-21P61565 698 aa17.04■□□□□ 0.32
PNKP-202ENST00000593706 SP2Q02086 613 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms