RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 MED24O75448 989 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 SKILP12757 684 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
NPC1-214ENST00000593280 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
NPC1-214ENST00000593280 UBXN2AP68543 259 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 CCZ1BP86790 482 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 CCZ1P86791 482 aaPredicted RBP13.34□□□□□ -0.27
NPC1-214ENST00000593280 SETQ01105 290 aaPredicted RBP13.34□□□□□ -0.27
NPC1-214ENST00000593280 FILIP1LQ4L180 1135 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 ARMCX5Q6P1M9 558 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 DYMQ7RTS9 669 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 CLEC4DQ8WXI8 215 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 DDX12PQ92771 950 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 RPTORQ8N122 1335 aa13.33□□□□□ -0.27
NPC1-214ENST00000593280 BICDL2A1A5D9 508 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 TRIM49BA6NDI0 452 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 E9PMD0 336 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPC1-214ENST00000593280 PLA2G4BP0C869 781 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 FCER1AP12319 257 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 HMGCS2P54868 508 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 GHRHRQ02643 423 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 STK4Q13043 487 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 NR1I3Q14994 352 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 CEP55Q53EZ4 464 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
NPC1-214ENST00000593280 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPC1-214ENST00000593280 NOC3LQ8WTT2 800 aaKnown RBP13.33□□□□□ -0.28
NPC1-214ENST00000593280 DCPSQ96C86 337 aaKnown RBP13.33□□□□□ -0.28
NPC1-214ENST00000593280 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
NPC1-214ENST00000593280 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
NPC1-214ENST00000593280 LIMA1Q9UHB6 759 aaKnown RBP13.33□□□□□ -0.28
NPC1-214ENST00000593280 POTEFA5A3E0 1075 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 KCNJ18B7U540 433 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 VWA5AO00534 786 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 IDEP14735 1019 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 CCNE1P24864 410 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 RPA1P27694 616 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 PSMD2Q13200 908 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 PRKG1Q13976 671 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 KCNJ12Q14500 433 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 TCP11X2Q5H9J9 407 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 LRCH2Q5VUJ6 765 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 SULF1Q8IWU6 871 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 KIAA0895Q8NCT3 520 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 SLC5A5Q92911 643 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 P2RX5Q93086 422 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 MAP3K20Q9NYL2 800 aaKnown RBP13.32□□□□□ -0.28
NPC1-214ENST00000593280 TMOD4Q9NZQ9 345 aa13.32□□□□□ -0.28
NPC1-214ENST00000593280 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
NPC1-214ENST00000593280 PMS1P54277 932 aaKnown RBP13.31□□□□□ -0.28
NPC1-214ENST00000593280 KRT31Q15323 416 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 PTPN21Q16825 1174 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 MUM1L1Q5H9M0 696 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 TTI2Q6NXR4 508 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 KRT26Q7Z3Y9 468 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 GPBP1Q86WP2 473 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 POLR3CQ9BUI4 534 aaPredicted RBP13.31□□□□□ -0.28
NPC1-214ENST00000593280 THAP9Q9H5L6 903 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 SLC39A2Q9NP94 309 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 COL20A1Q9P218 1284 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 PTPRFP10586 1907 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 ADM5C9JUS6 153 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 MEIS1O00470 390 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 GAS7O60861 476 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 USP2O75604 605 aaPredicted RBP13.31□□□□□ -0.28
NPC1-214ENST00000593280 PSMD10O75832 226 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 SPATA31C1P0DKV0 1188 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 OAZ1P54368 228 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 COASYQ13057 564 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 TBX2Q13207 712 aaPredicted RBP13.31□□□□□ -0.28
NPC1-214ENST00000593280 PPP2R5CQ13362 524 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
NPC1-214ENST00000593280 CCDC65Q8IXS2 484 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 HPS3Q969F9 1004 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 DNAJC19Q96DA6 116 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
NPC1-214ENST00000593280 MXRA8Q9BRK3 442 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 ZNF577Q9BSK1 485 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 PANK4Q9NVE7 773 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 MAGEC2Q9UBF1 373 aaPredicted RBP13.31□□□□□ -0.28
NPC1-214ENST00000593280 DNM3Q9UQ16 869 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 AFG3L2Q9Y4W6 797 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 LOC285556D6RIA3 1793 aa13.31□□□□□ -0.28
NPC1-214ENST00000593280 LOXHD1Q8IVV2 1947 aa13.3□□□□□ -0.28
NPC1-214ENST00000593280 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
NPC1-214ENST00000593280 EML1O00423 815 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms