RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 COG5Q9UP83 839 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 BRWD1Q9NSI6 2320 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 GGPS1O95749 300 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 CTSHP09668 335 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 PCP11498 1178 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 IL9P15248 144 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 UBA1P22314 1058 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 RBL2Q08999 1139 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 FCHSD1Q86WN1 690 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 MYOCDQ8IZQ8 938 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 DBF4BQ8NFT6 615 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 PPTC7Q8NI37 304 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 PIBF1Q8WXW3 757 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 PDCD2LQ9BRP1 358 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 C1QTNF1Q9BXJ1 281 aa13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 MRPL11Q9Y3B7 192 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-220ENST00000593104 ABHD14A-ACY1A0A1B0GW23 586 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 LGR5O75473 907 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 THPOP40225 353 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 HSD17B4P51659 736 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 ERVK-21P61565 698 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 PTK7Q13308 1070 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 PGM5Q15124 567 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 CELF3Q5SZQ8 465 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 MCF2L2Q86YR7 1114 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 TGS1Q96RS0 853 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 RAD9AQ99638 391 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 C16orf70Q9BSU1 422 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 AMNQ9BXJ7 453 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 UBE2ZQ9H832 354 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 DIAPH3Q9NSV4 1193 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 NCOR1O75376 2440 aa13.05□□□□□ -0.32
PRKCSH-220ENST00000593104 ATG2AQ2TAZ0 1938 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 KLRF2D3W0D1 207 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 TREHO43280 583 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 CSPG5O95196 566 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 KCNA5P22460 613 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 LAMC2Q13753 1193 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 IKBKEQ14164 716 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 SEC23AQ15436 765 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 IFIT1BQ5T764 474 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 TRIM50Q86XT4 487 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 EMID1Q96A84 441 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 PIGSQ96S52 555 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 PCDHA1Q9Y5I3 950 aa13.04□□□□□ -0.32
PRKCSH-220ENST00000593104 H3BQ06 376 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 UPP2O95045 317 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 SP4Q02446 784 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 TMEM31Q5JXX7 168 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 CHD1LQ86WJ1 897 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 MTMR8Q96EF0 704 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 UBAC1Q9BSL1 405 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 RTEL1Q9NZ71 1219 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 NLRC5Q86WI3 1866 aa13.03□□□□□ -0.32
PRKCSH-220ENST00000593104 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 RSPH10B2B2RC85 870 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 ZBTB5O15062 677 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 CYTH3O43739 400 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 LGALS2P05162 132 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 RSPH10BP0C881 870 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 SMIM10L2AP0DMW4 78 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 SMIM10L2BP0DMW5 78 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 SEMA3FQ13275 785 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 IMMTQ16891 758 aaKnown RBP13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 EP400NLQ6ZTU2 488 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 SERINC5Q86VE9 423 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 ATP6V0A1Q93050 837 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 MLXIPQ9HAP2 919 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 SETD4Q9NVD3 440 aa13.02□□□□□ -0.33
PRKCSH-220ENST00000593104 TRANK1O15050 2925 aa13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 C17orf102A2RUQ5 167 aa13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 AMHP03971 560 aa13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 MRPS9P82933 396 aaKnown RBP13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 NUCB1Q02818 461 aa13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 STOX1Q6ZVD7 989 aa13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 KRT23Q9C075 422 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms