RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 CELF3Q5SZQ8 465 aaKnown RBP17.53■□□□□ 0.4
TRIM47-206ENST00000592942 KCNV1Q6PIU1 500 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 CYP2W1Q8TAV3 490 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 RASGRP4Q8TDF6 673 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 AFG1LQ8WV93 481 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 UPF2Q9HAU5 1272 aaKnown RBP17.53■□□□□ 0.4
TRIM47-206ENST00000592942 H0YGN5 161 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 JAK2O60674 1132 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 ATP9AO75110 1047 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 UBA1P22314 1058 aaKnown RBP17.52■□□□□ 0.4
TRIM47-206ENST00000592942 PURAQ00577 322 aaKnown RBP17.52■□□□□ 0.4
TRIM47-206ENST00000592942 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 CCDC148Q8NFR7 591 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 JADE2Q9NQC1 790 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 STARD7Q9NQZ5 370 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-206ENST00000592942 TELO2Q9Y4R8 837 aa17.52■□□□□ 0.4
TRIM47-206ENST00000592942 MYH7BA7E2Y1 1941 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 FIBPO43427 364 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 CPT1AP50416 773 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 NLRP5P59047 1200 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 LAMC2Q13753 1193 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 GNPTABQ3T906 1256 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 TRIM60Q495X7 471 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 DHX37Q8IY37 1157 aaKnown RBP17.51■□□□□ 0.39
TRIM47-206ENST00000592942 C7orf61Q8IZ16 206 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 FAM177A1Q8N128 213 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-206ENST00000592942 ZSCAN31Q96LW9 406 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-206ENST00000592942 GLT1D1Q96MS3 346 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 MXRA8Q9BRK3 442 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 PHF20Q9BVI0 1012 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 PCDHA4Q9UN74 947 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 KCNJ14Q9UNX9 436 aa17.51■□□□□ 0.39
TRIM47-206ENST00000592942 MEIS1O00470 390 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 ZEB2O60315 1214 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 CABYRO75952 493 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 GGPS1O95749 300 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 MMP3P08254 477 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 CYP3A4P08684 503 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 HOXD8P13378 290 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-206ENST00000592942 PSMC6P62333 389 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 ARHGAP4P98171 946 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 TLE2Q04725 743 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 HSDL1Q3SXM5 330 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 REXO1Q8N1G1 1221 aaKnown RBP17.5■□□□□ 0.39
TRIM47-206ENST00000592942 DAGLBQ8NCG7 672 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 GPRASP2Q96D09 838 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 SENP7Q9BQF6 1050 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 NR2E3Q9Y5X4 410 aa17.5■□□□□ 0.39
TRIM47-206ENST00000592942 FAM86B1E9PN63 330 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 ARVCFO00192 962 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 MAFGO15525 162 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 SORBS3O60504 671 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 MYL3P08590 195 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 FAM86B2P0C5J1 330 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 ARP10275 920 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 KCNA2P16389 499 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 CEP55Q53EZ4 464 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 MCTP2Q6DN12 878 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 ANKRD33Q7Z3H0 272 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 NLRX1Q86UT6 975 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 BLIDQ8IZY5 108 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 IL27Q8NEV9 243 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 PPTC7Q8NI37 304 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 BICD2Q8TD16 824 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 KAT2BQ92831 832 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 ALG1Q9BT22 464 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 EHMT1Q9H9B1 1298 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 SH2B1Q9NRF2 756 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-206ENST00000592942 POLR3EQ9NVU0 708 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 ATP11BQ9Y2G3 1177 aa17.49■□□□□ 0.39
TRIM47-206ENST00000592942 IGLV3-22A0A075B6J6 115 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 KPNA6O60684 536 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 PPFIA4O75335 1185 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 FXR1P51114 621 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRIM47-206ENST00000592942 FAAP100Q0VG06 881 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 ITGA7Q13683 1181 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 NEDD9Q14511 834 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 CYFIP1Q7L576 1253 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 VTI1AQ96AJ9 217 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 TOX2Q96NM4 488 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 LLPHQ9BRT6 129 aaKnown RBP17.48■□□□□ 0.39
TRIM47-206ENST00000592942 MTG1Q9BT17 334 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-206ENST00000592942 KCNH7Q9NS40 1196 aa17.48■□□□□ 0.39
TRIM47-206ENST00000592942 ZMYND8Q9ULU4 1186 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-206ENST00000592942 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-206ENST00000592942 SYN1P17600 705 aa17.47■□□□□ 0.39
TRIM47-206ENST00000592942 CIITAP33076 1130 aa17.47■□□□□ 0.39
TRIM47-206ENST00000592942 MTMR1Q13613 665 aa17.47■□□□□ 0.39
TRIM47-206ENST00000592942 METTL7BQ6UX53 244 aa17.47■□□□□ 0.39
TRIM47-206ENST00000592942 OXER1Q8TDS5 423 aa17.47■□□□□ 0.39
TRIM47-206ENST00000592942 SPATA33Q96N06 139 aa17.47■□□□□ 0.39
TRIM47-206ENST00000592942 MLXIPQ9HAP2 919 aa17.47■□□□□ 0.39
TRIM47-206ENST00000592942 SCN10AQ9Y5Y9 1956 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 TRIM43BA6NCK2 446 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 ST18O60284 1047 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms