RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 TSHZ3Q63HK5 1081 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 SERINC5Q86VE9 423 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 PPTC7Q8NI37 304 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 NSUN6Q8TEA1 469 aaKnown RBP11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 YME1L1Q96TA2 773 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 TECTAO75443 2155 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 C5orf67F2Z3F1 127 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 RBAK-RBAKDNI3L0D1 243 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 MBTPS2O43462 519 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 PPFIA4O75335 1185 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 RB1P06400 928 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 SNHG28P0DPA3 235 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 THPOP40225 353 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 HIC1Q14526 733 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 IER5LQ5T953 404 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 SYTL5Q8TDW5 730 aaPredicted RBP11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 SEPT8Q92599 483 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 LMAN2LQ9H0V9 348 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 CACNA1HO95180 2353 aa11.89□□□□□ -0.51
SMCO4P1-201ENST00000592909 MYO7AQ13402 2215 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 ZNF286BP0CG31 522 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 FOXK2Q01167 660 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 DLX2Q07687 328 aaPredicted RBP11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 TRIM67Q6ZTA4 783 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 DHX37Q8IY37 1157 aaKnown RBP11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 TBC1D5Q92609 795 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 TTC14Q96N46 770 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 RMDN3Q96TC7 470 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 COL20A1Q9P218 1284 aa11.88□□□□□ -0.51
SMCO4P1-201ENST00000592909 COL4A6Q14031 1691 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 M0R296 226 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 STXBP3O00186 592 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 CAND2O75155 1236 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 UPP2O95045 317 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 HOXC8P31273 242 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 BMPR1AP36894 532 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 HYAL1Q12794 435 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 TCF15Q12870 199 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 ALX1Q15699 326 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 USH1GQ495M9 461 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 GPATCH4Q5T3I0 446 aaKnown RBP11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 MCF2L2Q86YR7 1114 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 PBXIP1Q96AQ6 731 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 C11orf84Q9BUA3 381 aaPredicted RBP11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 ZDBF2Q9HCK1 2354 aa11.87□□□□□ -0.51
SMCO4P1-201ENST00000592909 ABCB11O95342 1321 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 TTC41PQ6P2S7 1318 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 PTPRZ1P23471 2315 aaPredicted RBP11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 GRM6O15303 877 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 TBX10O75333 385 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 EYA4O95677 639 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 NR3C2P08235 984 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 LINC00271P0C7V0 271 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 CLUL1Q15846 466 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 MYSM1Q5VVJ2 828 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 SUGP1Q8IWZ8 645 aaKnown RBP11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 FIBCD1Q8N539 461 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 PI4K2BQ8TCG2 481 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 ALG13Q9NP73 1137 aaKnown RBP11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 CD207Q9UJ71 328 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
SMCO4P1-201ENST00000592909 WDFY4Q6ZS81 3184 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 C17orf102A2RUQ5 167 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 GFRA3O60609 400 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 CTNNB1P35222 781 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 ZXDAP98168 799 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 ADAM15Q13444 863 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 CDC37Q16543 378 aaPredicted RBP11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 HSDL1Q3SXM5 330 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 RRP12Q5JTH9 1297 aaKnown RBP11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 CELF3Q5SZQ8 465 aaKnown RBP11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 ARHGEF16Q5VV41 709 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 KCNV1Q6PIU1 500 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 FBXL6Q8N531 539 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 APBB2Q92870 758 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 CLP1Q92989 425 aaKnown RBP11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 ATP6V0A1Q93050 837 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 OSBPL7Q9BZF2 842 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 IRF2BPLQ9H1B7 796 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 TOMM22Q9NS69 142 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 MICAL3Q7RTP6 2002 aa11.85□□□□□ -0.51
SMCO4P1-201ENST00000592909 ZFHX2Q9C0A1 2572 aaPredicted RBP11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 LOC730098B7Z3J9 87 aa11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 TREHO43280 583 aa11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 HSPD1P10809 573 aaKnown RBP11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 GTF2F1P35269 517 aaKnown RBP eCLIP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms