RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 HAUS2Q9NVX0 235 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 FAN1Q9Y2M0 1017 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 EHHADHQ08426 723 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 TCP11X2Q5H9J9 407 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 EPSTI1Q96J88 318 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 MCAMP43121 646 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 LMNTD2Q8IXW0 634 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 JRKLQ9Y4A0 524 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 CEP152O94986 1710 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 USP31Q70CQ4 1352 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 SEPT14Q6ZU15 432 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 MB21D2Q8IYB1 491 aaPredicted RBP13.88□□□□□ -0.19
DNMT1-228ENST00000592705 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 STAG1Q8WVM7 1258 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 NHEJ1Q9H9Q4 299 aaPredicted RBP13.88□□□□□ -0.19
DNMT1-228ENST00000592705 CFAP157Q5JU67 520 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 GKAP1Q5VSY0 366 aaPredicted RBP13.88□□□□□ -0.19
DNMT1-228ENST00000592705 DCUN1D2Q6PH85 259 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 DHX40Q8IX18 779 aaKnown RBP13.88□□□□□ -0.19
DNMT1-228ENST00000592705 TTLL11Q8NHH1 800 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 CELF2O95319 508 aaKnown RBP13.88□□□□□ -0.19
DNMT1-228ENST00000592705 GNAT1P11488 350 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 KRT31Q15323 416 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 KRT12Q99456 494 aa13.88□□□□□ -0.19
DNMT1-228ENST00000592705 PRDM5Q9NQX1 630 aaPredicted RBP13.88□□□□□ -0.19
DNMT1-228ENST00000592705 SORBS3O60504 671 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 RCAN1P53805 252 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 RASGRF1Q13972 1273 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 C9orf131Q5VYM1 1079 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 RDH13Q8NBN7 331 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 RIOK1Q9BRS2 568 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 TEKT3Q9BXF9 490 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 USTQ9Y2C2 406 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 ARHGEF37A1IGU5 675 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 TLR3O15455 904 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 GCFC2P16383 781 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 DPEP1P16444 411 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 XKR9Q5GH70 373 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 TDRD3Q9H7E2 651 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 RRP15Q9Y3B9 282 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 CSPG5O95196 566 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 KRT15P19012 456 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 STAT2P52630 851 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 CLNS1AP54105 237 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 FKBP3Q00688 224 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 TERF2Q15554 542 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 ATP6V0A1Q93050 837 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 DPH5Q9H2P9 285 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 SERPINA10Q9UK55 444 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 KIAA1024Q9UPX6 916 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 COPB2P35606 906 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 P3H4Q92791 437 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 MRRFQ96E11 262 aaKnown RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 EEF2KMTQ96G04 330 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 SH3GLB2Q9NR46 395 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 CAMSAP1Q5T5Y3 1602 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 STX2P32856 288 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 PSMD2Q13200 908 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 SEPT2Q15019 361 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 FAM178BQ8IXR5 827 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 PROCA1Q8NCQ7 364 aaPredicted RBP13.87□□□□□ -0.19
DNMT1-228ENST00000592705 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 FAM114A2Q9NRY5 505 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 AKT3Q9Y243 479 aa13.87□□□□□ -0.19
DNMT1-228ENST00000592705 ABL1P00519 1130 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 PCK1P35558 622 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 CCT5P48643 541 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 POLGP54098 1239 aaPredicted RBP13.86□□□□□ -0.19
DNMT1-228ENST00000592705 NEDD9Q14511 834 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 CASP8Q14790 479 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 MARCH10Q8NA82 808 aaPredicted RBP13.86□□□□□ -0.19
DNMT1-228ENST00000592705 CCDC110Q8TBZ0 833 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 LGSNQ5TDP6 509 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 ARHGAP24Q8N264 748 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 TBCKQ8TEA7 893 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 GPR101Q96P66 508 aaPredicted RBP13.86□□□□□ -0.19
DNMT1-228ENST00000592705 HEXIM1O94992 359 aaKnown RBP13.86□□□□□ -0.19
DNMT1-228ENST00000592705 ELF1P32519 619 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 LIG3P49916 1009 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 PPARDQ03181 441 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 TSNAXIP1Q2TAA8 658 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 EEPD1Q7L9B9 569 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 ABCB6Q9NP58 842 aa13.86□□□□□ -0.19
DNMT1-228ENST00000592705 NCOA3Q9Y6Q9 1424 aa13.85□□□□□ -0.19
DNMT1-228ENST00000592705 C2orf54Q08AI8 447 aa13.85□□□□□ -0.19
DNMT1-228ENST00000592705 CCDC62Q6P9F0 684 aa13.85□□□□□ -0.19
DNMT1-228ENST00000592705 NSMCE1Q8WV22 266 aa13.85□□□□□ -0.19
DNMT1-228ENST00000592705 CRAMP1Q96RY5 1269 aa13.85□□□□□ -0.19
DNMT1-228ENST00000592705 CD209Q9NNX6 404 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms