RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 APOBRQ0VD83 1088 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 PPIGQ13427 754 aaKnown RBP eCLIP23.23■■□□□ 1.31
CIRBP-239ENST00000592467 PCNX4Q63HM2 1172 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 BLOC1S2Q6QNY1 142 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 SESTD1Q86VW0 696 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 TMEM199Q8N511 208 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 USP26Q9BXU7 913 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 F2P00734 622 aa23.22■■□□□ 1.31
CIRBP-239ENST00000592467 CASTP20810 708 aaKnown RBP23.22■■□□□ 1.31
CIRBP-239ENST00000592467 ADD1P35611 737 aaKnown RBP23.22■■□□□ 1.31
CIRBP-239ENST00000592467 DGKDQ16760 1214 aa23.22■■□□□ 1.31
CIRBP-239ENST00000592467 UBE2SQ16763 222 aa23.22■■□□□ 1.31
CIRBP-239ENST00000592467 FAM109BQ6ICB4 259 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-239ENST00000592467 DEFB123Q8N688 67 aa23.22■■□□□ 1.31
CIRBP-239ENST00000592467 BRF1Q92994 677 aa23.22■■□□□ 1.31
CIRBP-239ENST00000592467 CUL5Q93034 780 aa23.22■■□□□ 1.31
CIRBP-239ENST00000592467 RNPC3Q96LT9 517 aaKnown RBP23.22■■□□□ 1.31
CIRBP-239ENST00000592467 SORBS3O60504 671 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 SUPT20HL2P0C7V6 817 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 ACRP10323 421 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 CCL23P55773 120 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 SMAD3P84022 425 aaKnown RBP23.21■■□□□ 1.31
CIRBP-239ENST00000592467 XRRA1Q6P2D8 792 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 HEATR3Q7Z4Q2 680 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 IL23AQ9NPF7 189 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 MTMR10Q9NXD2 777 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 RTEL1Q9NZ71 1219 aa23.21■■□□□ 1.31
CIRBP-239ENST00000592467 V9GY48 417 aaPredicted RBP23.21■■□□□ 1.31
CIRBP-239ENST00000592467 STXBP3O00186 592 aa23.2■■□□□ 1.3
CIRBP-239ENST00000592467 EVCP57679 992 aa23.2■■□□□ 1.3
CIRBP-239ENST00000592467 FAM47CQ5HY64 1035 aa23.2■■□□□ 1.3
CIRBP-239ENST00000592467 GDF6Q6KF10 455 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-239ENST00000592467 ZNF365Q70YC5 407 aa23.2■■□□□ 1.3
CIRBP-239ENST00000592467 SPATA33Q96N06 139 aa23.2■■□□□ 1.3
CIRBP-239ENST00000592467 TELO2Q9Y4R8 837 aa23.2■■□□□ 1.3
CIRBP-239ENST00000592467 TRIP12Q14669 1992 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-239ENST00000592467 FIBPO43427 364 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 PPFIA4O75335 1185 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 ZNF286BP0CG31 522 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 PSEN2P49810 448 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 GNPTABQ3T906 1256 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 SCLYQ96I15 445 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 C16orf70Q9BSU1 422 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 ZSWIM6Q9HCJ5 1215 aa23.19■■□□□ 1.3
CIRBP-239ENST00000592467 CDH23Q9H251 3354 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 ITGB5P18084 799 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 METAP2P50579 478 aaKnown RBP eCLIP23.18■■□□□ 1.3
CIRBP-239ENST00000592467 HIC1Q14526 733 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 PPP1R18Q6NYC8 613 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 RIC8AQ9NPQ8 531 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 BARHL2Q9NY43 387 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 HDAC6Q9UBN7 1215 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 GTF2IRD1Q9UHL9 959 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 PCDHA6Q9UN73 950 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 PCDHA8Q9Y5H6 950 aa23.18■■□□□ 1.3
CIRBP-239ENST00000592467 PSMA5P28066 241 aa23.17■■□□□ 1.3
CIRBP-239ENST00000592467 TOB2Q14106 344 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-239ENST00000592467 MFSD10Q14728 455 aa23.17■■□□□ 1.3
CIRBP-239ENST00000592467 NTRK3Q16288 839 aa23.17■■□□□ 1.3
CIRBP-239ENST00000592467 PSRC1Q6PGN9 363 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-239ENST00000592467 RUFY3Q7L099 469 aa23.17■■□□□ 1.3
CIRBP-239ENST00000592467 HERVK_113Q902F9 699 aa23.17■■□□□ 1.3
CIRBP-239ENST00000592467 DHX38Q92620 1227 aaKnown RBP23.17■■□□□ 1.3
CIRBP-239ENST00000592467 UBIAD1Q9Y5Z9 338 aa23.17■■□□□ 1.3
CIRBP-239ENST00000592467 GBF1Q92538 1859 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 hCG_1984214I3L0E3 225 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 PITPNM1O00562 1244 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 ATP9AO75110 1047 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 CLK2P49760 499 aaKnown RBP23.16■■□□□ 1.3
CIRBP-239ENST00000592467 NAPAP54920 295 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 FGD1P98174 961 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 PKN1Q16512 942 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-239ENST00000592467 KIAA0753Q2KHM9 967 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 METTL7BQ6UX53 244 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 TEX2Q8IWB9 1127 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 ZNF713Q8N859 430 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-239ENST00000592467 GPR20Q99678 358 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 SENP7Q9BQF6 1050 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 MLXIPQ9HAP2 919 aa23.16■■□□□ 1.3
CIRBP-239ENST00000592467 CXXC1Q9P0U4 656 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-239ENST00000592467 TET1Q8NFU7 2136 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 ADAMTS3O15072 1205 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 KCNA2P16389 499 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 CHMP4BP1P59074 171 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 NEDD9Q14511 834 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 PTGISQ16647 500 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 CYFIP1Q7L576 1253 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 GPRASP2Q96D09 838 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 GUCD1Q96NT3 240 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 ALG1Q9BT22 464 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 KATNAL1Q9BW62 490 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 TM6SF1Q9BZW5 370 aa23.15■■□□□ 1.3
CIRBP-239ENST00000592467 TTYH1Q9H313 450 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-239ENST00000592467 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-239ENST00000592467 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-239ENST00000592467 IQCF3P0C7M6 154 aa23.14■■□□□ 1.29
CIRBP-239ENST00000592467 PDIA3P30101 505 aaKnown RBP23.14■■□□□ 1.29
CIRBP-239ENST00000592467 HOXC8P31273 242 aa23.14■■□□□ 1.29
CIRBP-239ENST00000592467 RBL2Q08999 1139 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms