RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 POLR2MP0CAP2 368 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 CKBP12277 381 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 POU3F3P20264 500 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-230ENST00000591055 WDR5P61964 334 aaKnown RBP18.26■□□□□ 0.51
CIRBP-230ENST00000591055 PTH1RQ03431 593 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 PTK7Q13308 1070 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 GPNMBQ14956 572 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 PGM5Q15124 567 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 SKIV2LQ15477 1246 aaKnown RBP18.26■□□□□ 0.51
CIRBP-230ENST00000591055 SLC35G1Q2M3R5 365 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 CELF3Q5SZQ8 465 aaKnown RBP18.26■□□□□ 0.51
CIRBP-230ENST00000591055 MYSM1Q5VVJ2 828 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 CNKSR3Q6P9H4 555 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 SPATA33Q96N06 139 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 PIGSQ96S52 555 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 RIOX1Q9H6W3 641 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 MTCH2Q9Y6C9 303 aa18.26■□□□□ 0.51
CIRBP-230ENST00000591055 EPOPA6NHQ4 379 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 ARHGEF15O94989 841 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 GGPS1O95749 300 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 CXCL10P02778 98 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 HOXD8P13378 290 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-230ENST00000591055 CCND2P30279 289 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 WTAPQ15007 396 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 SART3Q15020 963 aaKnown RBP18.25■□□□□ 0.51
CIRBP-230ENST00000591055 RALYLQ86SE5 291 aaKnown RBP18.25■□□□□ 0.51
CIRBP-230ENST00000591055 FCHSD1Q86WN1 690 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 IL31RAQ8NI17 732 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 UHRF1Q96T88 793 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-230ENST00000591055 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
CIRBP-230ENST00000591055 XIRP2A4UGR9 3374 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 NBNO60934 754 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 TGFB3P10600 412 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 CHMLP26374 656 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 HSDL1Q3SXM5 330 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 MLXIPQ9HAP2 919 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 SENP2Q9HC62 589 aa18.24■□□□□ 0.51
CIRBP-230ENST00000591055 PNMA6FA0A0J9YX94 578 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 E7EWF7 191 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 CYTH3O43739 400 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 UBA1P22314 1058 aaKnown RBP18.23■□□□□ 0.51
CIRBP-230ENST00000591055 DEFB103AP81534 67 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 ZNF200P98182 395 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-230ENST00000591055 SP2Q02086 613 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 AAK1Q2M2I8 961 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 TRIM71Q2Q1W2 868 aaKnown RBP18.23■□□□□ 0.51
CIRBP-230ENST00000591055 ZNF618Q5T7W0 954 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 TMCO2Q7Z6W1 182 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-230ENST00000591055 GPKOWQ92917 476 aaPredicted RBP eCLIP18.23■□□□□ 0.51
CIRBP-230ENST00000591055 ZFP91Q96JP5 570 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-230ENST00000591055 PTPRSQ13332 1948 aa18.23■□□□□ 0.51
CIRBP-230ENST00000591055 TCF20Q9UGU0 1960 aaKnown RBP18.22■□□□□ 0.51
CIRBP-230ENST00000591055 ABHD14A-ACY1A0A1B0GW23 586 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 EFCAB14O75071 495 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 TFF2Q03403 129 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 TROAPQ12815 778 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 KRT40Q6A162 431 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 CATIPQ7Z7H3 387 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 WNT8BQ93098 351 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
CIRBP-230ENST00000591055 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
CIRBP-230ENST00000591055 LCHNA4D1U4 455 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 GRB10Q13322 594 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 IKBKEQ14164 716 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 TRAF7Q6Q0C0 670 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 SPRED2Q7Z698 418 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 RAD9AQ99638 391 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 C16orf70Q9BSU1 422 aa18.21■□□□□ 0.51
CIRBP-230ENST00000591055 SGSM2O43147 1006 aa18.2■□□□□ 0.5
CIRBP-230ENST00000591055 GJB5O95377 273 aa18.2■□□□□ 0.5
CIRBP-230ENST00000591055 BMP1P13497 986 aa18.2■□□□□ 0.5
CIRBP-230ENST00000591055 HIC1Q14526 733 aa18.2■□□□□ 0.5
CIRBP-230ENST00000591055 MBTPS1Q14703 1052 aa18.2■□□□□ 0.5
CIRBP-230ENST00000591055 EMSYQ7Z589 1322 aa18.2■□□□□ 0.5
CIRBP-230ENST00000591055 C17orf102A2RUQ5 167 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 H3BRB1 525 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 NOP56O00567 594 aaKnown RBP18.19■□□□□ 0.5
CIRBP-230ENST00000591055 LGR5O75473 907 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 STAM2O75886 525 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 LGALS2P05162 132 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 THPOP40225 353 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 ANTXR2P58335 489 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 SERINC5Q86VE9 423 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 ATP6V0A1Q93050 837 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 TUT1Q9H6E5 874 aaKnown RBP18.19■□□□□ 0.5
CIRBP-230ENST00000591055 BCAS3Q9H6U6 928 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 BRWD1Q9NSI6 2320 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 COG5Q9UP83 839 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 FRMPD4Q14CM0 1322 aa18.19■□□□□ 0.5
CIRBP-230ENST00000591055 RSPH10B2B2RC85 870 aa18.18■□□□□ 0.5
CIRBP-230ENST00000591055 LPXNO60711 386 aa18.18■□□□□ 0.5
CIRBP-230ENST00000591055 RSPH10BP0C881 870 aa18.18■□□□□ 0.5
CIRBP-230ENST00000591055 SMIM10L2AP0DMW4 78 aa18.18■□□□□ 0.5
CIRBP-230ENST00000591055 SMIM10L2BP0DMW5 78 aa18.18■□□□□ 0.5
CIRBP-230ENST00000591055 ICAM3P32942 547 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms