RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 MCTP2Q6DN12 878 aa24.04■■□□□ 1.44
CIRBP-229ENST00000590704 TLK2Q86UE8 772 aa24.04■■□□□ 1.44
CIRBP-229ENST00000590704 ANKLE1Q8NAG6 615 aa24.04■■□□□ 1.44
CIRBP-229ENST00000590704 TBCKQ8TEA7 893 aa24.04■■□□□ 1.44
CIRBP-229ENST00000590704 WNT7AO00755 349 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 TGFB3P10600 412 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 KCNA2P16389 499 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 CAPN2P17655 700 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 XBP1P17861 261 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 UBA1P22314 1058 aaKnown RBP24.03■■□□□ 1.44
CIRBP-229ENST00000590704 BEX3Q00994 111 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 CEP55Q53EZ4 464 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 MYSM1Q5VVJ2 828 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 GPRASP2Q96D09 838 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 PAWRQ96IZ0 340 aaKnown RBP24.03■■□□□ 1.44
CIRBP-229ENST00000590704 C8orf76Q96K31 380 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 DOCK5Q9H7D0 1870 aa24.03■■□□□ 1.44
CIRBP-229ENST00000590704 NKRFO15226 690 aaKnown RBP eCLIP24.02■■□□□ 1.44
CIRBP-229ENST00000590704 DIS3L2Q8IYB7 885 aaKnown RBP24.02■■□□□ 1.44
CIRBP-229ENST00000590704 MBOAT7Q96N66 472 aa24.02■■□□□ 1.44
CIRBP-229ENST00000590704 MRVI1Q9Y6F6 885 aa24.02■■□□□ 1.44
CIRBP-229ENST00000590704 KIF28PB7ZC32 967 aa24.01■■□□□ 1.43
CIRBP-229ENST00000590704 DNM1LO00429 736 aa24.01■■□□□ 1.43
CIRBP-229ENST00000590704 FIBPO43427 364 aa24.01■■□□□ 1.43
CIRBP-229ENST00000590704 USP11P51784 963 aa24.01■■□□□ 1.43
CIRBP-229ENST00000590704 KCNA10Q16322 511 aa24.01■■□□□ 1.43
CIRBP-229ENST00000590704 CELF3Q5SZQ8 465 aaKnown RBP24.01■■□□□ 1.43
CIRBP-229ENST00000590704 ARRDC4Q8NCT1 418 aa24.01■■□□□ 1.43
CIRBP-229ENST00000590704 EMID1Q96A84 441 aaPredicted RBP24.01■■□□□ 1.43
CIRBP-229ENST00000590704 INTS4Q96HW7 963 aaKnown RBP24.01■■□□□ 1.43
CIRBP-229ENST00000590704 KCNH7Q9NS40 1196 aa24.01■■□□□ 1.43
CIRBP-229ENST00000590704 CYP3A7-CYP3A51PA0A087WV96 503 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 A6NJR5 290 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 CYP3A7P24462 503 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 KRT2P35908 639 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 INF2Q27J81 1249 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 NIPA1Q7RTP0 329 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 SENP7Q9BQF6 1050 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 PHF24Q9UPV7 400 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 DHX15O43143 795 aaKnown RBP24■■□□□ 1.43
CIRBP-229ENST00000590704 FARP2O94887 1054 aaPredicted RBP24■■□□□ 1.43
CIRBP-229ENST00000590704 C6orf222P0C671 652 aaPredicted RBP24■■□□□ 1.43
CIRBP-229ENST00000590704 HSDL1Q3SXM5 330 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 KCNV1Q6PIU1 500 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 PIK3AP1Q6ZUJ8 805 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 KRT25Q7Z3Z0 450 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 FAM184AQ8NB25 1140 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 EHMT1Q9H9B1 1298 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 SMC3Q9UQE7 1217 aa24■■□□□ 1.43
CIRBP-229ENST00000590704 ZSCAN21Q9Y5A6 473 aaPredicted RBP24■■□□□ 1.43
CIRBP-229ENST00000590704 MAFGO15525 162 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 TDP2O95551 362 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 GH1P01241 217 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 HOXD8P13378 290 aaPredicted RBP23.99■■□□□ 1.43
CIRBP-229ENST00000590704 ITGB3BPQ13352 177 aaPredicted RBP23.99■■□□□ 1.43
CIRBP-229ENST00000590704 NONOQ15233 471 aaKnown RBP eCLIP23.99■■□□□ 1.43
CIRBP-229ENST00000590704 FSCN1Q16658 493 aaKnown RBP23.99■■□□□ 1.43
CIRBP-229ENST00000590704 GNPTABQ3T906 1256 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 GNASQ5JWF2 1037 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 NLRX1Q86UT6 975 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 OR6J1Q8NGC5 347 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 AFG1LQ8WV93 481 aa23.99■■□□□ 1.43
CIRBP-229ENST00000590704 TSEN34Q9BSV6 310 aaKnown RBP23.99■■□□□ 1.43
CIRBP-229ENST00000590704 AGO4Q9HCK5 861 aaKnown RBP23.99■■□□□ 1.43
CIRBP-229ENST00000590704 GRIN2DO15399 1336 aa23.98■■□□□ 1.43
CIRBP-229ENST00000590704 SORBS3O60504 671 aa23.98■■□□□ 1.43
CIRBP-229ENST00000590704 GGPS1O95749 300 aa23.98■■□□□ 1.43
CIRBP-229ENST00000590704 ASGR1P07306 291 aa23.98■■□□□ 1.43
CIRBP-229ENST00000590704 U2AF2P26368 475 aaKnown RBP eCLIP23.98■■□□□ 1.43
CIRBP-229ENST00000590704 MTMR1Q13613 665 aa23.98■■□□□ 1.43
CIRBP-229ENST00000590704 RNF180Q86T96 592 aa23.98■■□□□ 1.43
CIRBP-229ENST00000590704 ALPK3Q96L96 1907 aa23.97■■□□□ 1.43
CIRBP-229ENST00000590704 ACLYP53396 1101 aa23.97■■□□□ 1.43
CIRBP-229ENST00000590704 FOXP1Q9H334 677 aaPredicted RBP23.97■■□□□ 1.43
CIRBP-229ENST00000590704 TNRC18O15417 2968 aaPredicted RBP23.97■■□□□ 1.43
CIRBP-229ENST00000590704 Q4G0T1 1027 aa23.96■■□□□ 1.43
CIRBP-229ENST00000590704 CYFIP1Q7L576 1253 aa23.96■■□□□ 1.43
CIRBP-229ENST00000590704 PLA2G4DQ86XP0 818 aa23.96■■□□□ 1.43
CIRBP-229ENST00000590704 DHX37Q8IY37 1157 aaKnown RBP23.96■■□□□ 1.43
CIRBP-229ENST00000590704 UIMC1Q96RL1 719 aa23.96■■□□□ 1.43
CIRBP-229ENST00000590704 AP5M1Q9H0R1 490 aa23.96■■□□□ 1.43
CIRBP-229ENST00000590704 FOXD4L1Q9NU39 408 aa23.96■■□□□ 1.43
CIRBP-229ENST00000590704 SLC37A4O43826 429 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 MMP3P08254 477 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 LAMC2Q13753 1193 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 MOXD1Q6UVY6 613 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 METTL7BQ6UX53 244 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 KAT2BQ92831 832 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 GJA10Q969M2 543 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 FERMT2Q96AC1 680 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 SENP6Q9GZR1 1112 aaPredicted RBP23.95■■□□□ 1.42
CIRBP-229ENST00000590704 C11orf49Q9H6J7 331 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 SCN10AQ9Y5Y9 1956 aa23.95■■□□□ 1.42
CIRBP-229ENST00000590704 A0A1W2PQ45 241 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-229ENST00000590704 A0A1W2PQY0 241 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 MOXD2PA6NHM9 499 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 MSH4O15457 936 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 PURAQ00577 322 aaKnown RBP23.94■■□□□ 1.42
CIRBP-229ENST00000590704 TRIM29Q14134 588 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 PRR16Q569H4 304 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms