RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 TBC1D5Q92609 795 aa18.92■□□□□ 0.62
GCDH-213ENST00000590627 TOX2Q96NM4 488 aa18.92■□□□□ 0.62
GCDH-213ENST00000590627 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
GCDH-213ENST00000590627 DUSP11O75319 330 aaKnown RBP18.91■□□□□ 0.62
GCDH-213ENST00000590627 CFBP00751 764 aa18.91■□□□□ 0.62
GCDH-213ENST00000590627 UBE2SQ16763 222 aa18.91■□□□□ 0.62
GCDH-213ENST00000590627 ANKRD33Q7Z3H0 272 aa18.91■□□□□ 0.62
GCDH-213ENST00000590627 LENG1Q96BZ8 264 aaPredicted RBP18.91■□□□□ 0.62
GCDH-213ENST00000590627 ABHD16BQ9H3Z7 469 aa18.91■□□□□ 0.62
GCDH-213ENST00000590627 STARD7Q9NQZ5 370 aa18.91■□□□□ 0.62
GCDH-213ENST00000590627 ZHX1Q9UKY1 873 aaPredicted RBP18.91■□□□□ 0.62
GCDH-213ENST00000590627 ATP6V1DQ9Y5K8 247 aa18.91■□□□□ 0.62
GCDH-213ENST00000590627 PQBP1O60828 265 aaKnown RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 RAG1P15918 1043 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 ITGB8P26012 769 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 CST5P28325 142 aaPredicted RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 ACLYP53396 1101 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 RPS6P62753 249 aaKnown RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 ACVR2BQ13705 512 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 EARS2Q5JPH6 523 aaKnown RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 FOXD4L5Q5VV16 416 aaPredicted RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 JAKMIP3Q5VZ66 844 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 CCSAPQ6IQ19 270 aaPredicted RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 RNF207Q6ZRF8 634 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 ANKRD35Q8N283 1001 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 RASGRP4Q8TDF6 673 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 FOXD4L4Q8WXT5 416 aaPredicted RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 FAM161BQ96MY7 647 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 TMEM260Q9NX78 707 aa18.9■□□□□ 0.62
GCDH-213ENST00000590627 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.9■□□□□ 0.62
GCDH-213ENST00000590627 CCDC194A0A1B0GVG4 234 aa18.89■□□□□ 0.61
GCDH-213ENST00000590627 HOXA13P31271 388 aaPredicted RBP18.89■□□□□ 0.61
GCDH-213ENST00000590627 SYTL5Q8TDW5 730 aaPredicted RBP18.89■□□□□ 0.61
GCDH-213ENST00000590627 SEMA6BQ9H3T3 888 aa18.89■□□□□ 0.61
GCDH-213ENST00000590627 TMEM39AQ9NV64 488 aa18.89■□□□□ 0.61
GCDH-213ENST00000590627 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.61
GCDH-213ENST00000590627 ELP1O95163 1332 aa18.89■□□□□ 0.61
GCDH-213ENST00000590627 DCDC2CA8MYV0 355 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 TRAPPC10P48553 1259 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 FAAP100Q0VG06 881 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 BAATQ14032 418 aaPredicted RBP18.88■□□□□ 0.61
GCDH-213ENST00000590627 NONOQ15233 471 aaKnown RBP eCLIP18.88■□□□□ 0.61
GCDH-213ENST00000590627 KCNA10Q16322 511 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 MYSM1Q5VVJ2 828 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 ATL3Q6DD88 541 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 PIK3AP1Q6ZUJ8 805 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 PCSK9Q8NBP7 692 aaKnown RBP18.88■□□□□ 0.61
GCDH-213ENST00000590627 FGD4Q96M96 766 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 GLT1D1Q96MS3 346 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 SPC25Q9HBM1 224 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 MROH7Q68CQ1 1323 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 MCM3APO60318 1980 aa18.88■□□□□ 0.61
GCDH-213ENST00000590627 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 SPDYE3A6NKU9 549 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 FPGSQ05932 587 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 FRMPD4Q14CM0 1322 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 RILPL1Q5EBL4 403 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 SLC30A10Q6XR72 485 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 ARMCX2Q7L311 632 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.87■□□□□ 0.61
GCDH-213ENST00000590627 CRYGNQ8WXF5 182 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 TNPO1Q92973 898 aaKnown RBP18.87■□□□□ 0.61
GCDH-213ENST00000590627 RNPC3Q96LT9 517 aaKnown RBP18.87■□□□□ 0.61
GCDH-213ENST00000590627 CDX2Q99626 313 aaPredicted RBP18.87■□□□□ 0.61
GCDH-213ENST00000590627 ANO3Q9BYT9 981 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 UPF3AQ9H1J1 476 aaKnown RBP18.87■□□□□ 0.61
GCDH-213ENST00000590627 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 COL20A1Q9P218 1284 aa18.87■□□□□ 0.61
GCDH-213ENST00000590627 FAM205CA6NFA0 338 aa18.86■□□□□ 0.61
GCDH-213ENST00000590627 C6orf222P0C671 652 aaPredicted RBP18.86■□□□□ 0.61
GCDH-213ENST00000590627 SREBF1P36956 1147 aa18.86■□□□□ 0.61
GCDH-213ENST00000590627 TOB1P50616 345 aaPredicted RBP18.86■□□□□ 0.61
GCDH-213ENST00000590627 GJA9P57773 515 aa18.86■□□□□ 0.61
GCDH-213ENST00000590627 CCDC144BQ3MJ40 725 aa18.86■□□□□ 0.61
GCDH-213ENST00000590627 CLEC17AQ6ZS10 378 aa18.86■□□□□ 0.61
GCDH-213ENST00000590627 FCHSD1Q86WN1 690 aa18.86■□□□□ 0.61
GCDH-213ENST00000590627 EHMT1Q9H9B1 1298 aa18.86■□□□□ 0.61
GCDH-213ENST00000590627 NOL7Q9UMY1 257 aaKnown RBP18.86■□□□□ 0.61
GCDH-213ENST00000590627 MYADML2A6NDP7 307 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 ADCY6O43306 1168 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 ASGR1P07306 291 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 CDK7P50613 346 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 USP11P51784 963 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 EPHB4P54760 987 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 NKX3-2P78367 333 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 INF2Q27J81 1249 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 FAM173BQ6P4H8 233 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 FAM133AQ8N9E0 248 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 TBCKQ8TEA7 893 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 ZNF396Q96N95 335 aaPredicted RBP18.85■□□□□ 0.61
GCDH-213ENST00000590627 KATNBL1Q9H079 304 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 TTYH1Q9H313 450 aaPredicted RBP18.85■□□□□ 0.61
GCDH-213ENST00000590627 TBX21Q9UL17 535 aa18.85■□□□□ 0.61
GCDH-213ENST00000590627 EDIL3O43854 480 aa18.84■□□□□ 0.61
GCDH-213ENST00000590627 TIMP1P01033 207 aa18.84■□□□□ 0.61
GCDH-213ENST00000590627 CYP3A4P08684 503 aa18.84■□□□□ 0.61
GCDH-213ENST00000590627 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
GCDH-213ENST00000590627 DNERQ8NFT8 737 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms