RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CEP95Q96GE4 821 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 MMS19Q96T76 1030 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 K7ENM7 598 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 MYO1CO00159 1063 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 ZNF365Q70YC5 407 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 CPXCR1Q8N123 301 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 ANKRD65E5RJM6 399 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 FAM196AQ6ZSG2 479 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 CROCCP2Q86T23 111 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 SPATS2Q86XZ4 545 aaKnown RBP18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 HPS3Q969F9 1004 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 HOMER2Q9NSB8 354 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 FHOD1Q9Y613 1164 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 PGRMC1O00264 195 aaKnown RBP18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 FERP16591 822 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 EMBQ6PCB8 327 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 MIER3Q7Z3K6 550 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 THRAP3Q9Y2W1 955 aaKnown RBP18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 EFCAB13Q8IY85 973 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 OSBPL9Q96SU4 736 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■■■■ 29.3
SMARCA4-215ENST00000590574 GCNT4Q9P109 453 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 PVALEFA0A1B0GWK0 134 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 ZNF185O15231 689 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 CAMTA2O94983 1202 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 CEP72Q9P209 647 aa18.73■□□□□ 0.59
SMARCA4-215ENST00000590574 POLR2MP0CAP2 368 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 KRT26Q7Z3Y9 468 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 CACNA2D3Q8IZS8 1091 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 UHMK1Q8TAS1 419 aaKnown RBP18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 AGPAT5Q9NUQ2 364 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 PARP2Q9UGN5 583 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 HGSO14964 777 aaPredicted RBP18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 GFPT2O94808 682 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 FOSP01100 380 aaPredicted RBP18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 C12orf60Q5U649 245 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 AP1M1Q9BXS5 423 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 PPEF1O14829 653 aaPredicted RBP18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 MGARPQ8TDB4 240 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 CCDC17Q96LX7 622 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 HARSP12081 509 aaKnown RBP18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 LMNB1P20700 586 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 PLA2G4AP47712 749 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 FAM186BQ8IYM0 893 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 SPICE1Q8N0Z3 855 aa18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 MRRFQ96E11 262 aaKnown RBP18.72■□□□□ 0.59
SMARCA4-215ENST00000590574 SERPINB2P05120 415 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 PSMC2P35998 433 aaKnown RBP18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 SETDB1Q15047 1291 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 ODR4Q5SWX8 454 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 TRIM9Q9C026 710 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 UBXN2AP68543 259 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 MYL7Q01449 175 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 COASYQ13057 564 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 PPP2R5EQ16537 467 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 ABCB5Q2M3G0 1257 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 PRPF6O94906 941 aaKnown RBP18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 LIN9Q5TKA1 542 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 PBKQ96KB5 322 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 CCSER1Q9C0I3 900 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 IQCGQ9H095 443 aaKnown RBP18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 USTQ9Y2C2 406 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 SRGNP10124 158 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 ANAPC4Q9UJX5 808 aa18.71■□□□□ 0.59
SMARCA4-215ENST00000590574 TCRBV5S4A2TA0A5A2 114 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 E9PMD0 336 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 TDP2O95551 362 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 HOXA7P31268 230 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 IRX3P78415 501 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 LRCH2Q5VUJ6 765 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 TMED8Q6PL24 325 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 NARFQ9UHQ1 456 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 SMIM5Q71RC9 77 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 RHOBTB3O94955 611 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 NTSR2O95665 410 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 FOXP4Q8IVH2 680 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 CDC37Q16543 378 aaPredicted RBP18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 C10orf76Q5T2E6 689 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 PROM2Q8N271 834 aa18.7■□□□□ 0.58
SMARCA4-215ENST00000590574 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 GDF11O95390 407 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 TBC1D8O95759 1140 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 SNAP25P60880 206 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 WHAMMQ8TF30 809 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 ANO3Q9BYT9 981 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 KCNQ2O43526 872 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 BBOX1O75936 387 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 IFT88Q13099 833 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 INTS8Q75QN2 995 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 CHURC1Q8WUH1 139 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 TROAPQ12815 778 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 DPH6Q7L8W6 267 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 COG1Q8WTW3 980 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 TEKT3Q9BXF9 490 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 FAM114A2Q9NRY5 505 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 TARSL2A2RTX5 802 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 NR1D1P20393 614 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms