RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 KAT2BQ92831 832 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 ALG1Q9BT22 464 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 ZSWIM6Q9HCJ5 1215 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 PCDHA6Q9UN73 950 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 PCDHA8Q9Y5H6 950 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 CYP46A1Q9Y6A2 500 aa20.7■□□□□ 0.9
CIRBP-227ENST00000590188 MYH7BA7E2Y1 1941 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 SCN10AQ9Y5Y9 1956 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 STXBP3O00186 592 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 EPB41L2O43491 1005 aaKnown RBP20.69■□□□□ 0.9
CIRBP-227ENST00000590188 SP4Q02446 784 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 TOB2Q14106 344 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-227ENST00000590188 PCNX4Q63HM2 1172 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 TMEM199Q8N511 208 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 PHKBQ93100 1093 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 EMID1Q96A84 441 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-227ENST00000590188 RNPC3Q96LT9 517 aaKnown RBP20.69■□□□□ 0.9
CIRBP-227ENST00000590188 INPP4AQ96PE3 977 aaPredicted RBP20.69■□□□□ 0.9
CIRBP-227ENST00000590188 NOC4LQ9BVI4 516 aaKnown RBP20.69■□□□□ 0.9
CIRBP-227ENST00000590188 SEZ6LQ9BYH1 1024 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 AGXT2Q9BYV1 514 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 NCOA5Q9HCD5 579 aaKnown RBP20.69■□□□□ 0.9
CIRBP-227ENST00000590188 SZT2Q5T011 3432 aa20.69■□□□□ 0.9
CIRBP-227ENST00000590188 CCDC196A0A1B0GTZ2 297 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 SMCO2A6NFE2 343 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 PSEN2P49810 448 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 ADCY7P51828 1080 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 PPIGQ13427 754 aaKnown RBP eCLIP20.68■□□□□ 0.94e-12■■■□□ 16.7
CIRBP-227ENST00000590188 NFRKBQ6P4R8 1299 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 Q7L0L9 218 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 CYFIP1Q7L576 1253 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 SCLYQ96I15 445 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.68■□□□□ 0.92e-15■■■□□ 14.8
CIRBP-227ENST00000590188 TMEM260Q9NX78 707 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 PKD2L1Q9P0L9 805 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 NOD1Q9Y239 953 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 TELO2Q9Y4R8 837 aa20.68■□□□□ 0.9
CIRBP-227ENST00000590188 SPATA31C2B4DYI2 1134 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 FIBPO43427 364 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 STAM2O75886 525 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 TGFB3P10600 412 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 PDIA3P30101 505 aaKnown RBP20.67■□□□□ 0.9
CIRBP-227ENST00000590188 ICAM3P32942 547 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 PPP1R18Q6NYC8 613 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 NLRX1Q86UT6 975 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 WNT8AQ9H1J5 351 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 RIC8AQ9NPQ8 531 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 BARHL2Q9NY43 387 aa20.67■□□□□ 0.9
CIRBP-227ENST00000590188 SUPT20HL2P0C7V6 817 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 SCG2P13521 617 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 STK3Q13188 491 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 MFSD10Q14728 455 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 PFKFB3Q16875 520 aaPredicted RBP20.66■□□□□ 0.9
CIRBP-227ENST00000590188 KIAA0753Q2KHM9 967 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 GDF6Q6KF10 455 aaPredicted RBP20.66■□□□□ 0.9
CIRBP-227ENST00000590188 C16orf59Q7L2K0 433 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 FBXL16Q8N461 479 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 SLC26A6Q9BXS9 759 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 PDRG1Q9NUG6 133 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 NID2Q14112 1375 aa20.66■□□□□ 0.9
CIRBP-227ENST00000590188 DOCK5Q9H7D0 1870 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 hCG_1984214I3L0E3 225 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 NOP56O00567 594 aaKnown RBP20.65■□□□□ 0.9
CIRBP-227ENST00000590188 AKAP17AQ02040 695 aaKnown RBP20.65■□□□□ 0.9
CIRBP-227ENST00000590188 NEDD9Q14511 834 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 PTGISQ16647 500 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 XRRA1Q6P2D8 792 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 ZNF365Q70YC5 407 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 ZNF713Q8N859 430 aaPredicted RBP20.65■□□□□ 0.9
CIRBP-227ENST00000590188 C7orf31Q8N865 590 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 ANO3Q9BYT9 981 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 TM6SF1Q9BZW5 370 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 EHMT1Q9H9B1 1298 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 HDAC6Q9UBN7 1215 aa20.65■□□□□ 0.9
CIRBP-227ENST00000590188 ADAMTS3O15072 1205 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 PRPF3O43395 683 aaKnown RBP20.64■□□□□ 0.89
CIRBP-227ENST00000590188 F2P00734 622 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 ITGB5P18084 799 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 PTPN11Q06124 597 aaPredicted RBP20.64■□□□□ 0.89
CIRBP-227ENST00000590188 PKN1Q16512 942 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 TMEM240Q5SV17 173 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 UTP14CQ5TAP6 766 aaKnown RBP20.64■□□□□ 0.89
CIRBP-227ENST00000590188 JAKMIP3Q5VZ66 844 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 DEFB123Q8N688 67 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 KATNAL1Q9BW62 490 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 IL23AQ9NPF7 189 aa20.64■□□□□ 0.89
CIRBP-227ENST00000590188 RBAK-RBAKDNI3L0D1 243 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 ATP9AO75110 1047 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 PPFIA4O75335 1185 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 LGALS2P05162 132 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 NTRK3Q16288 839 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 METTL7BQ6UX53 244 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 GPRASP2Q96D09 838 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 FAM161BQ96MY7 647 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 UBIAD1Q9Y5Z9 338 aa20.63■□□□□ 0.89
CIRBP-227ENST00000590188 HAS3O00219 553 aa20.62■□□□□ 0.89
CIRBP-227ENST00000590188 HOXD8P13378 290 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-227ENST00000590188 EVCP57679 992 aa20.62■□□□□ 0.89
CIRBP-227ENST00000590188 ZNF200P98182 395 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-227ENST00000590188 MTMR1Q13613 665 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms