RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 EMID1Q96A84 441 aaPredicted RBP13.86□□□□□ -0.19
TPM4-212ENST00000590180 LRCH3Q96II8 777 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 ALG1Q9BT22 464 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 AGXT2Q9BYV1 514 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 BCAS3Q9H6U6 928 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 EHMT1Q9H9B1 1298 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 RIC8AQ9NPQ8 531 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 TRMT13Q9NUP7 481 aaKnown RBP13.86□□□□□ -0.19
TPM4-212ENST00000590180 DNAH12Q6ZR08 3092 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 STXBP3O00186 592 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 PRPF3O43395 683 aaKnown RBP13.85□□□□□ -0.19
TPM4-212ENST00000590180 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
TPM4-212ENST00000590180 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
TPM4-212ENST00000590180 ICAM3P32942 547 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 EPHB4P54760 987 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 CCL23P55773 120 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 TOB2Q14106 344 aaPredicted RBP13.85□□□□□ -0.19
TPM4-212ENST00000590180 NEDD9Q14511 834 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
TPM4-212ENST00000590180 HSDL1Q3SXM5 330 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 NFRKBQ6P4R8 1299 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
TPM4-212ENST00000590180 PHKBQ93100 1093 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 INPP4AQ96PE3 977 aaPredicted RBP13.85□□□□□ -0.19
TPM4-212ENST00000590180 GLT8D2Q9H1C3 349 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 BARHL2Q9NY43 387 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 NOD1Q9Y239 953 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 FRMPD4Q14CM0 1322 aa13.85□□□□□ -0.19
TPM4-212ENST00000590180 NOP56O00567 594 aaKnown RBP13.84□□□□□ -0.19
TPM4-212ENST00000590180 FIBPO43427 364 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 FOSP01100 380 aaPredicted RBP13.84□□□□□ -0.19
TPM4-212ENST00000590180 CYP2C9P11712 490 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 SCG2P13521 617 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 CSF2RAP15509 400 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 PSEN2P49810 448 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 EVCP57679 992 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 PTPN11Q06124 597 aaPredicted RBP13.84□□□□□ -0.19
TPM4-212ENST00000590180 STK3Q13188 491 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 PPIGQ13427 754 aaKnown RBP eCLIP13.84□□□□□ -0.19
TPM4-212ENST00000590180 PPP1R18Q6NYC8 613 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 CYFIP1Q7L576 1253 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 KAT2BQ92831 832 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 PGBD1Q96JS3 809 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 SLC26A6Q9BXS9 759 aa13.84□□□□□ -0.19
TPM4-212ENST00000590180 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
TPM4-212ENST00000590180 RANBP2P49792 3224 aaKnown RBP13.84□□□□□ -0.19
TPM4-212ENST00000590180 CPLX1O14810 134 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 ZNF286BP0CG31 522 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 ACRP10323 421 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 SP4Q02446 784 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 SSRP1Q08945 709 aaKnown RBP13.83□□□□□ -0.2
TPM4-212ENST00000590180 SEMA3FQ13275 785 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 MFSD10Q14728 455 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 KIAA0753Q2KHM9 967 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 JAKMIP3Q5VZ66 844 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 C7orf31Q8N865 590 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 RETREG2Q8NC44 543 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
TPM4-212ENST00000590180 CDHR1Q96JP9 859 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
TPM4-212ENST00000590180 KATNAL1Q9BW62 490 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 C6orf50Q9HD87 102 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 TMEM260Q9NX78 707 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 PKD2L1Q9P0L9 805 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 HDAC6Q9UBN7 1215 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 UMODL1Q5DID0 1318 aa13.83□□□□□ -0.2
TPM4-212ENST00000590180 MYH7BA7E2Y1 1941 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 KIAA1217Q5T5P2 1943 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 IFNAR1P17181 557 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 ITGB5P18084 799 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 ZNF76P36508 570 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 NTRK3Q16288 839 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 PKN1Q16512 942 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 PTGISQ16647 500 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 UTP14CQ5TAP6 766 aaKnown RBP13.82□□□□□ -0.2
TPM4-212ENST00000590180 CPLX2Q6PUV4 134 aaKnown RBP13.82□□□□□ -0.2
TPM4-212ENST00000590180 METTL7BQ6UX53 244 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 ZNF365Q70YC5 407 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 TRIM22Q8IYM9 498 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
TPM4-212ENST00000590180 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
TPM4-212ENST00000590180 GPRASP2Q96D09 838 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 RNPC3Q96LT9 517 aaKnown RBP13.82□□□□□ -0.2
TPM4-212ENST00000590180 SENP7Q9BQF6 1050 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 JADE2Q9NQC1 790 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 UBIAD1Q9Y5Z9 338 aa13.82□□□□□ -0.2
TPM4-212ENST00000590180 ATP9AO75110 1047 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 SEC24BO95487 1268 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 GNA11P29992 359 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 ANAPC15P60006 121 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 MTMR1Q13613 665 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 GDF6Q6KF10 455 aaPredicted RBP13.81□□□□□ -0.2
TPM4-212ENST00000590180 C16orf59Q7L2K0 433 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 TEX2Q8IWB9 1127 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 RPUSD2Q8IZ73 545 aaKnown RBP13.81□□□□□ -0.2
TPM4-212ENST00000590180 SCLYQ96I15 445 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms