RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SELPP16109 830 aa20.76■□□□□ 0.91
PRKCSH-211ENST00000590098 KIAA0753Q2KHM9 967 aa20.76■□□□□ 0.91
PRKCSH-211ENST00000590098 TJAP1Q5JTD0 557 aa20.76■□□□□ 0.91
PRKCSH-211ENST00000590098 CELF3Q5SZQ8 465 aaKnown RBP20.76■□□□□ 0.91
PRKCSH-211ENST00000590098 LRRC8DQ7L1W4 858 aa20.76■□□□□ 0.91
PRKCSH-211ENST00000590098 IL31RAQ8NI17 732 aa20.76■□□□□ 0.91
PRKCSH-211ENST00000590098 IGDCC4Q8TDY8 1250 aa20.76■□□□□ 0.91
PRKCSH-211ENST00000590098 CA3P07451 260 aa20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 KCNJ6P48051 423 aa20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 CASC1Q6TDU7 716 aa20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 HERC6Q8IVU3 1022 aa20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 MB21D2Q8IYB1 491 aaPredicted RBP20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 CTCFLQ8NI51 663 aaPredicted RBP20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 PIBF1Q8WXW3 757 aa20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 MLXIPQ9HAP2 919 aa20.75■□□□□ 0.91
PRKCSH-211ENST00000590098 HAS3O00219 553 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 CKBP12277 381 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 KIF5BP33176 963 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 ANTXR2P58335 489 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 RBL2Q08999 1139 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 PTK7Q13308 1070 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 GPNMBQ14956 572 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 HSDL1Q3SXM5 330 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 DHX38Q92620 1227 aaKnown RBP20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 ZFP91Q96JP5 570 aaPredicted RBP20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 MAP3K14Q99558 947 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 THEGQ9P2T0 379 aa20.74■□□□□ 0.91
PRKCSH-211ENST00000590098 HOXD8P13378 290 aaPredicted RBP20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 UBA1P22314 1058 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 SP2Q02086 613 aa20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 GNPTABQ3T906 1256 aa20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 ATXN2LQ8WWM7 1075 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 TSPYL2Q9H2G4 693 aaPredicted RBP20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 LY9Q9HBG7 655 aa20.73■□□□□ 0.91
PRKCSH-211ENST00000590098 RFXAPO00287 272 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 PRC1O43663 620 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 STAM2O75886 525 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 DDAH1O94760 285 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 ARHGEF15O94989 841 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 CNKSR3Q6P9H4 555 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 NFXL1Q6ZNB6 911 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 TMTC2Q8N394 836 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 MICALL1Q8N3F8 863 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 CUL5Q93034 780 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 SPZ1Q9BXG8 430 aa20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 SEC63Q9UGP8 760 aaKnown RBP20.72■□□□□ 0.91
PRKCSH-211ENST00000590098 NOP56O00567 594 aaKnown RBP20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 TLL1O43897 1013 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 MCM5P33992 734 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 GNAQP50148 359 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 SMARCC2Q8TAQ2 1214 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 GPKOWQ92917 476 aaPredicted RBP eCLIP20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 LZTS2Q9BRK4 669 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 MYL10Q9BUA6 226 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 CERS4Q9HA82 394 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 REV3LO60673 3130 aa20.71■□□□□ 0.91
PRKCSH-211ENST00000590098 CCDC69A6NI79 296 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 GTPBP6O43824 516 aaPredicted RBP20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 CXCL10P02778 98 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 SMARCA1P28370 1054 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 WDR5P61964 334 aaKnown RBP20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 ZNF200P98182 395 aaPredicted RBP20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 NEDD9Q14511 834 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 TMEM87BQ96K49 555 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 C16orf70Q9BSU1 422 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 ZBED2Q9BTP6 218 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 FRMPD4Q14CM0 1322 aa20.7■□□□□ 0.9
PRKCSH-211ENST00000590098 PRRC2BQ5JSZ5 2229 aaKnown RBP20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 ABHD14A-ACY1A0A1B0GW23 586 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 H3BRB1 525 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 NBNO60934 754 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 ICAM3P32942 547 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 MRPS5P82675 430 aaKnown RBP20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 MRPS9P82933 396 aaKnown RBP20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 TAP1Q03518 808 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 TCTN1Q2MV58 587 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 ZNF618Q5T7W0 954 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 ARNTL2Q8WYA1 636 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 INPP4AQ96PE3 977 aaPredicted RBP20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 ASB2Q96Q27 587 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 LSG1Q9H089 658 aaKnown RBP20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 TUT1Q9H6E5 874 aaKnown RBP20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 RTEL1Q9NZ71 1219 aa20.69■□□□□ 0.9
PRKCSH-211ENST00000590098 PTPRSQ13332 1948 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 NCOR1O75376 2440 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 C17orf102A2RUQ5 167 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 EPOPA6NHQ4 379 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 SPATA31C2B4DYI2 1134 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 FIBPO43427 364 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 EFCAB14O75071 495 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 CALM1P0DP23 149 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 CALM2P0DP24 149 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 CALM3P0DP25 149 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 IKBKEQ14164 716 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 HIC1Q14526 733 aa20.68■□□□□ 0.9
PRKCSH-211ENST00000590098 TRIM71Q2Q1W2 868 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms