RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 KIAA0753Q2KHM9 967 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 HSDL1Q3SXM5 330 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 RRP36Q96EU6 259 aaKnown RBP14.12□□□□□ -0.15
VAT1-206ENST00000589709 SPATA33Q96N06 139 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 SLC9A7Q96T83 725 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 MYO9BQ13459 2157 aa14.12□□□□□ -0.15
VAT1-206ENST00000589709 SPATA31C2B4DYI2 1134 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 PIK3CDO00329 1044 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 SH2B2O14492 632 aaPredicted RBP14.11□□□□□ -0.15
VAT1-206ENST00000589709 SLC27A2O14975 620 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 BAIAP3O94812 1187 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 CALM1P0DP23 149 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 CALM2P0DP24 149 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 CALM3P0DP25 149 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 UBA1P22314 1058 aaKnown RBP14.11□□□□□ -0.15
VAT1-206ENST00000589709 RABGGTBP53611 331 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 MRPS9P82933 396 aaKnown RBP14.11□□□□□ -0.15
VAT1-206ENST00000589709 PTK7Q13308 1070 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 GPNMBQ14956 572 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 GNPTABQ3T906 1256 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 BMP2KLQ5H9B9 411 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 CREB3L3Q68CJ9 461 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 XRRA1Q6P2D8 792 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
VAT1-206ENST00000589709 INPP4AQ96PE3 977 aaPredicted RBP14.11□□□□□ -0.15
VAT1-206ENST00000589709 ALG1Q9BT22 464 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 FTOQ9C0B1 505 aaKnown RBP eCLIP14.11□□□□□ -0.15
VAT1-206ENST00000589709 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
VAT1-206ENST00000589709 CDH23Q9H251 3354 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 PRUNE2Q8WUY3 3088 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 CXCL10P02778 98 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 ZNF286BP0CG31 522 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 ADGRE1Q14246 886 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 NEDD9Q14511 834 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 LRRC8DQ7L1W4 858 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 USP38Q8NB14 1042 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 CUL5Q93034 780 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 C16orf70Q9BSU1 422 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 MYL10Q9BUA6 226 aa14.1□□□□□ -0.15
VAT1-206ENST00000589709 SEC63Q9UGP8 760 aaKnown RBP14.1□□□□□ -0.15
VAT1-206ENST00000589709 MEIS2O14770 477 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 CKBP12277 381 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 MYOGP15173 224 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 TRIM71Q2Q1W2 868 aaKnown RBP14.09□□□□□ -0.15
VAT1-206ENST00000589709 PCNX4Q63HM2 1172 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 PPP2R2DQ66LE6 453 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 METTL7BQ6UX53 244 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 CENPQQ7L2Z9 268 aaPredicted RBP14.09□□□□□ -0.15
VAT1-206ENST00000589709 SGMS1Q86VZ5 419 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 HERC6Q8IVU3 1022 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 SRBD1Q8N5C6 995 aaKnown RBP14.09□□□□□ -0.15
VAT1-206ENST00000589709 SMARCC2Q8TAQ2 1214 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 PIBF1Q8WXW3 757 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 GPKOWQ92917 476 aaPredicted RBP eCLIP14.09□□□□□ -0.15
VAT1-206ENST00000589709 ZFP91Q96JP5 570 aaPredicted RBP14.09□□□□□ -0.15
VAT1-206ENST00000589709 SENP7Q9BQF6 1050 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 ANO2Q9NQ90 1003 aa14.09□□□□□ -0.15
VAT1-206ENST00000589709 SCN5AQ14524 2016 aa14.08□□□□□ -0.15
VAT1-206ENST00000589709 KIF28PB7ZC32 967 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 H3BRB1 525 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 FIBPO43427 364 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 PLEKHA8P1O95397 391 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 POU3F3P20264 500 aaPredicted RBP14.08□□□□□ -0.16
VAT1-206ENST00000589709 HOXC8P31273 242 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 COL9A3Q14050 684 aaPredicted RBP14.08□□□□□ -0.16
VAT1-206ENST00000589709 RNF20Q5VTR2 975 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 TRAF7Q6Q0C0 670 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 USP17L6PQ6QN14 398 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 SERINC5Q86VE9 423 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 SYMPKQ92797 1274 aaKnown RBP14.08□□□□□ -0.16
VAT1-206ENST00000589709 USP26Q9BXU7 913 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 TUT1Q9H6E5 874 aaKnown RBP14.08□□□□□ -0.16
VAT1-206ENST00000589709 SLC12A7Q9Y666 1083 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 EYSQ5T1H1 3165 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 TET1Q8NFU7 2136 aa14.08□□□□□ -0.16
VAT1-206ENST00000589709 MYH7BA7E2Y1 1941 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 CHD7Q9P2D1 2997 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
VAT1-206ENST00000589709 ABHD14A-ACY1A0A1B0GW23 586 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
VAT1-206ENST00000589709 SORBS3O60504 671 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 NBNO60934 754 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 EFCAB14O75071 495 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 LGALS2P05162 132 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 CA3P07451 260 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 IGFBP4P22692 258 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 KCNJ6P48051 423 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 HIC1Q14526 733 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 TSGA10IPQ3SY00 556 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 CNKSR3Q6P9H4 555 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 TEX2Q8IWB9 1127 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 GIMAP8Q8ND71 665 aaPredicted RBP14.07□□□□□ -0.16
VAT1-206ENST00000589709 GPR20Q99678 358 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 BCAS3Q9H6U6 928 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 PSTPIP2Q9H939 334 aa14.07□□□□□ -0.16
VAT1-206ENST00000589709 RTEL1Q9NZ71 1219 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms