RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 GNPTABQ3T906 1256 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 DUSP28Q4G0W2 176 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 TAPT1Q6NXT6 567 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 USP17L6PQ6QN14 398 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 SEPT14Q6ZU15 432 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 TLK2Q86UE8 772 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 VSIG10LQ86VR7 867 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 WASF1Q92558 559 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 LENG1Q96BZ8 264 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 ASB2Q96Q27 587 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 UHRF1Q96T88 793 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
APOC1-204ENST00000589078 RIC8AQ9NPQ8 531 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 SYNRGQ9UMZ2 1314 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
APOC1-204ENST00000589078 A0A1W2PQ45 241 aaPredicted RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 A0A1W2PQY0 241 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 ESYT2A0FGR8 921 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 MOXD2PA6NHM9 499 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 TXNP10599 105 aaKnown RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 SMPD1P17405 629 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 CST5P28325 142 aaPredicted RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 CPT1AP50416 773 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 SCRN1Q12765 414 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 AP3B2Q13367 1082 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 PGM5Q15124 567 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 FSCN1Q16658 493 aaKnown RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 GNASQ5JWF2 1037 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 GTF3C6Q969F1 213 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 PRDM12Q9H4Q4 367 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 SH3GLB2Q9NR46 395 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 TMEM39AQ9NV64 488 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 MRVI1Q9Y6F6 885 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
APOC1-204ENST00000589078 FRMPD4Q14CM0 1322 aa11.07□□□□□ -0.64
APOC1-204ENST00000589078 BAZ2BQ9UIF8 2168 aaKnown RBP11.06□□□□□ -0.64
APOC1-204ENST00000589078 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.06□□□□□ -0.64
APOC1-204ENST00000589078 ADAMTS4O75173 837 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 CABYRO75952 493 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 TGFB3P10600 412 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 PBX2P40425 430 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 NLRP5P59047 1200 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 NKX3-2P78367 333 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 PKN1Q16512 942 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 UBE2SQ16763 222 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 PCNX4Q63HM2 1172 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 GALNT17Q6IS24 598 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 NLRX1Q86UT6 975 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 REXO1Q8N1G1 1221 aaKnown RBP11.06□□□□□ -0.64
APOC1-204ENST00000589078 KLHDC9Q8NEP7 349 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 OR6J1Q8NGC5 347 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 CDHR1Q96JP9 859 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 ZSCAN31Q96LW9 406 aaPredicted RBP11.06□□□□□ -0.64
APOC1-204ENST00000589078 GLT1D1Q96MS3 346 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 TBC1D32Q96NH3 1257 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.06□□□□□ -0.649e-7■□□□□ 9.7
APOC1-204ENST00000589078 PBX4Q9BYU1 374 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 ZMYND12Q9H0C1 365 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 SH2B1Q9NRF2 756 aaPredicted RBP11.06□□□□□ -0.64
APOC1-204ENST00000589078 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 STK36Q9NRP7 1315 aa11.06□□□□□ -0.64
APOC1-204ENST00000589078 GRXCR1A8MXD5 290 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 ADCY6O43306 1168 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 KPNA6O60684 536 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 GH1P01241 217 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
APOC1-204ENST00000589078 MCM2P49736 904 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 ACLYP53396 1101 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 MRPS5P82675 430 aaKnown RBP11.05□□□□□ -0.64
APOC1-204ENST00000589078 FAAP100Q0VG06 881 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 CCDC85BQ15834 202 aaPredicted RBP11.05□□□□□ -0.64
APOC1-204ENST00000589078 KCNA10Q16322 511 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 ME3Q16798 604 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 IL31RAQ8NI17 732 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 VPS54Q9P1Q0 977 aa11.05□□□□□ -0.64
APOC1-204ENST00000589078 ORC3Q9UBD5 711 aaPredicted RBP11.05□□□□□ -0.64
APOC1-204ENST00000589078 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
APOC1-204ENST00000589078 FIBPO43427 364 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 TIMP1P01033 207 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 LAMC2Q13753 1193 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 ADGRE1Q14246 886 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 ANKRD33Q7Z3H0 272 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 NECAB1Q8N987 351 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 NECAB3Q96P71 396 aaPredicted RBP11.04□□□□□ -0.64
APOC1-204ENST00000589078 INPP4AQ96PE3 977 aaPredicted RBP11.04□□□□□ -0.64
APOC1-204ENST00000589078 KIF2CQ99661 725 aa11.04□□□□□ -0.64
APOC1-204ENST00000589078 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms