RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 CTCFP49711 727 aaPredicted RBP9.74□□□□□ -0.85
ATG4D-210ENST00000588972 EIF5P55010 431 aaKnown RBP9.74□□□□□ -0.85
ATG4D-210ENST00000588972 PPP2R2AP63151 447 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 DCTN1Q14203 1278 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 PRAMEF13Q5VWM6 474 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 CDC37L1Q7L3B6 337 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 MCM10Q7L590 875 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 LDHDQ86WU2 507 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 TTC5Q8N0Z6 440 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 ZNF513Q8N8E2 541 aaPredicted RBP9.74□□□□□ -0.85
ATG4D-210ENST00000588972 KCT2Q8NC54 265 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 IER2Q9BTL4 223 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.74□□□□□ -0.85
ATG4D-210ENST00000588972 CAAP1Q9H8G2 361 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 HOMER2Q9NSB8 354 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 LRP2BPQ9P2M1 347 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 SLX4Q8IY92 1834 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 ERBB4Q15303 1308 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 PASKQ96RG2 1323 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 CEMIPQ8WUJ3 1361 aa9.74□□□□□ -0.85
ATG4D-210ENST00000588972 ADAMTSL1Q8N6G6 1762 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 DLL1O00548 723 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 DDNO94850 711 aaPredicted RBP9.73□□□□□ -0.85
ATG4D-210ENST00000588972 CST3P01034 146 aaPredicted RBP9.73□□□□□ -0.85
ATG4D-210ENST00000588972 ADH5P11766 374 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 CCDC181Q5TID7 509 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 TBC1D9BQ66K14 1250 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 Q6ZNB5 142 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 RNF180Q86T96 592 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 ZNF227Q86WZ6 799 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 CNBD1Q8NA66 436 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 LRRN4CLQ8ND94 238 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 FGD4Q96M96 766 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 SUGCTQ9HAC7 445 aa9.73□□□□□ -0.85
ATG4D-210ENST00000588972 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
ATG4D-210ENST00000588972 NPHP1O15259 732 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 AMPD1P23109 780 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 SOX5P35711 763 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 ST5P78524 1137 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 TEFQ10587 303 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 DCAF15Q66K64 600 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 STYK1Q6J9G0 422 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 KIAA1211Q6ZU35 1233 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 DDX42Q86XP3 938 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 SCUBE1Q8IWY4 988 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 SMG8Q8ND04 991 aaKnown RBP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 RTF1Q92541 710 aaKnown RBP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 PPP1R14AQ96A00 147 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 ISL2Q96A47 359 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 ZNF512BQ96KM6 892 aaPredicted RBP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 IPO9Q96P70 1041 aaKnown RBP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 THUMPD2Q9BTF0 503 aaKnown RBP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 LGR4Q9BXB1 951 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 MRPL4Q9BYD3 311 aaKnown RBP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 TAF1DQ9H5J8 278 aaPredicted RBP9.72□□□□□ -0.85
ATG4D-210ENST00000588972 KDM3BQ7LBC6 1761 aa9.72□□□□□ -0.85
ATG4D-210ENST00000588972 THSD7BQ9C0I4 1608 aa9.71□□□□□ -0.85
ATG4D-210ENST00000588972 GSG1L2A8MUP6 293 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 CAPNS1P04632 268 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 SRGNP10124 158 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 BCRP11274 1271 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 FGFR1P11362 822 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 FBXO11Q86XK2 927 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 UBR7Q8N806 425 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 RUNDC1Q96C34 613 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 MASTLQ96GX5 879 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 TEX13AQ9BXU3 409 aaPredicted RBP9.71□□□□□ -0.86
ATG4D-210ENST00000588972 PNNQ9H307 717 aaKnown RBP9.71□□□□□ -0.86
ATG4D-210ENST00000588972 GSX1Q9H4S2 264 aaPredicted RBP9.71□□□□□ -0.86
ATG4D-210ENST00000588972 HEG1Q9ULI3 1381 aa9.71□□□□□ -0.86
ATG4D-210ENST00000588972 SPDYE3A6NKU9 549 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 PABPC1P11940 636 aaKnown RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 TMPOP42166 694 aaKnown RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 GRIA2P42262 883 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 RIPK4P57078 832 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 SOX4Q06945 474 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 CCDC93Q567U6 631 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 ODR4Q5SWX8 454 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 FMR1NBQ8N0W7 255 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 PNISRQ8TF01 805 aaKnown RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 JDP2Q8WYK2 163 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 ZNF496Q96IT1 587 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-210ENST00000588972 FOXQ1Q9C009 403 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 RNF208Q9H0X6 261 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 CYP4F12Q9HCS2 524 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 MAPRE3Q9UPY8 281 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 ZNF451Q9Y4E5 1061 aa9.7□□□□□ -0.86
ATG4D-210ENST00000588972 RASSF10A6NK89 507 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 BTBD11A6QL63 1104 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 PRODHO43272 600 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 TBX1O43435 398 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 KCNQ3O43525 872 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 HTATSF1O43719 755 aaKnown RBP9.69□□□□□ -0.86
ATG4D-210ENST00000588972 CAMTA2O94983 1202 aa9.69□□□□□ -0.86
ATG4D-210ENST00000588972 SLURP2P0DP57 97 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms