RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 KCTD2Q14681 263 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 NIPA1Q7RTP0 329 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 RASSF8Q8NHQ8 419 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 MORF4L1Q9UBU8 362 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 PP2D1A8MPX8 630 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 POTEB2H3BUK9 544 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 LONRF3Q496Y0 759 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.1■■□□□ 1.611e-7■■■■■ 46
ATG4D-209ENST00000588857 CNNM3Q8NE01 707 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 DNERQ8NFT8 737 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 GJA10Q969M2 543 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 ZFP91Q96JP5 570 aaPredicted RBP25.1■■□□□ 1.61
ATG4D-209ENST00000588857 UIMC1Q96RL1 719 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 CCSER1Q9C0I3 900 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 CCDC39Q9UFE4 941 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 NR3C2P08235 984 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 MRPS9P82933 396 aaKnown RBP25.09■■□□□ 1.61
ATG4D-209ENST00000588857 KRBA2Q6ZNG9 492 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 IQUBQ8NA54 791 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 DHX58Q96C10 678 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 CCDC34Q96HJ3 373 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 MMP19Q99542 508 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 ADD3Q9UEY8 706 aaKnown RBP25.09■■□□□ 1.61
ATG4D-209ENST00000588857 USP25Q9UHP3 1055 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 HOOK1Q9UJC3 728 aaKnown RBP25.09■■□□□ 1.61
ATG4D-209ENST00000588857 UBIAD1Q9Y5Z9 338 aa25.09■■□□□ 1.61
ATG4D-209ENST00000588857 BCRP11274 1271 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 FCER1AP12319 257 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 ITGB5P18084 799 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 GSE1Q14687 1217 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 CABP7Q86V35 215 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 VSIG10LQ86VR7 867 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 CKAP2LQ8IYA6 745 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 IWS1Q96ST2 819 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 ZNF577Q9BSK1 485 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 JADE2Q9NQC1 790 aa25.08■■□□□ 1.61
ATG4D-209ENST00000588857 KIAA1217Q5T5P2 1943 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 PLXNB2O15031 1838 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 A0A087X0B3 334 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 POTEMA6NI47 508 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 CNTN2Q02246 1040 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 TAF1CQ15572 869 aaPredicted RBP25.07■■□□□ 1.6
ATG4D-209ENST00000588857 KANK3Q6NY19 840 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 CEP57L1Q8IYX8 460 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 PORCNQ9H237 461 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 SERTAD1Q9UHV2 236 aa25.07■■□□□ 1.6
ATG4D-209ENST00000588857 MTMR1Q13613 665 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 KARSQ15046 597 aaKnown RBP25.06■■□□□ 1.6
ATG4D-209ENST00000588857 ZRSR1Q15695 479 aaKnown RBP25.06■■□□□ 1.6
ATG4D-209ENST00000588857 FAM110CQ1W6H9 321 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 KRT79Q5XKE5 535 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 LRSAM1Q6UWE0 723 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 RBM43Q6ZSC3 357 aaKnown RBP25.06■■□□□ 1.6
ATG4D-209ENST00000588857 SLC5A5Q92911 643 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 CALML4Q96GE6 196 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 R3HDMLQ9H3Y0 253 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 EFCC1Q9HA90 598 aa25.06■■□□□ 1.6
ATG4D-209ENST00000588857 ARP10275 920 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 LRCH2Q5VUJ6 765 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 RRAGBQ5VZM2 374 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 WDR11Q9BZH6 1224 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 DISC1Q9NRI5 854 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 KCNH7Q9NS40 1196 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 B4DLN1 442 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 GPR25O00155 361 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 ACTN4O43707 911 aaKnown RBP25.05■■□□□ 1.6
ATG4D-209ENST00000588857 STAM2O75886 525 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 SLFN14P0C7P3 912 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 STAT6P42226 847 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 ALDH5A1P51649 535 aaPredicted RBP25.05■■□□□ 1.6
ATG4D-209ENST00000588857 NLRX1Q86UT6 975 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 ELOA2Q8IYF1 753 aaPredicted RBP25.05■■□□□ 1.6
ATG4D-209ENST00000588857 FAM133AQ8N9E0 248 aa25.05■■□□□ 1.6
ATG4D-209ENST00000588857 MPHOSPH6Q99547 160 aaKnown RBP25.05■■□□□ 1.6
ATG4D-209ENST00000588857 IPO5O00410 1097 aaKnown RBP25.04■■□□□ 1.6
ATG4D-209ENST00000588857 GAS7O60861 476 aa25.04■■□□□ 1.6
ATG4D-209ENST00000588857 SNX29Q8TEQ0 813 aa25.04■■□□□ 1.6
ATG4D-209ENST00000588857 CDK5RAP3Q96JB5 506 aa25.04■■□□□ 1.6
ATG4D-209ENST00000588857 MMTAG2Q9BU76 263 aaKnown RBP25.04■■□□□ 1.6
ATG4D-209ENST00000588857 STK24Q9Y6E0 443 aa25.04■■□□□ 1.6
ATG4D-209ENST00000588857 IVNS1ABPQ9Y6Y0 642 aa25.04■■□□□ 1.6
ATG4D-209ENST00000588857 STXBP2Q15833 593 aa25.03■■□□□ 1.6
ATG4D-209ENST00000588857 E2F4Q16254 413 aa25.03■■□□□ 1.6
ATG4D-209ENST00000588857 NCAPH2Q6IBW4 605 aa25.03■■□□□ 1.6
ATG4D-209ENST00000588857 ERMNQ8TAM6 284 aa25.03■■□□□ 1.6
ATG4D-209ENST00000588857 ZNF296Q8WUU4 475 aaPredicted RBP25.03■■□□□ 1.6
ATG4D-209ENST00000588857 RIT2Q99578 217 aa25.03■■□□□ 1.6
ATG4D-209ENST00000588857 VAV3Q9UKW4 847 aa25.03■■□□□ 1.6
ATG4D-209ENST00000588857 PLXNA1Q9UIW2 1896 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.02■■□□□ 1.6
ATG4D-209ENST00000588857 SOWAHBA6NEL2 793 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 STRNO43815 780 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 PSMD10O75832 226 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 PGK2P07205 417 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 SPIRE1Q08AE8 756 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 SASS6Q6UVJ0 657 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 GPRASP2Q96D09 838 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 TEKT3Q9BXF9 490 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 ZFYVE28Q9HCC9 887 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 AGO4Q9HCK5 861 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms