RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MTMR1Q13613 665 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 LY6KQ17RY6 165 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 DUSP28Q4G0W2 176 aa21.59■■□□□ 1.05
CLPTM1-209ENST00000588855 SPATA31C2B4DYI2 1134 aa21.58■■□□□ 1.04
CLPTM1-209ENST00000588855 MEIS1O00470 390 aa21.58■■□□□ 1.04
CLPTM1-209ENST00000588855 DUSP11O75319 330 aaKnown RBP21.58■■□□□ 1.04
CLPTM1-209ENST00000588855 ANP32AP39687 249 aaKnown RBP21.58■■□□□ 1.04
CLPTM1-209ENST00000588855 LETM2Q2VYF4 491 aa21.58■■□□□ 1.04
CLPTM1-209ENST00000588855 U2AF1L4Q8WU68 220 aaKnown RBP21.58■■□□□ 1.04
CLPTM1-209ENST00000588855 DDX41Q9UJV9 622 aaKnown RBP21.58■■□□□ 1.04
CLPTM1-209ENST00000588855 ARP10275 920 aa21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 UBA1P22314 1058 aaKnown RBP21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 SP2Q02086 613 aa21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 KCNV1Q6PIU1 500 aa21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 NIPA1Q7RTP0 329 aa21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 TLK2Q86UE8 772 aa21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 XPNPEP3Q9NQH7 507 aa21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 SYNRGQ9UMZ2 1314 aa21.57■■□□□ 1.04
CLPTM1-209ENST00000588855 POTEFA5A3E0 1075 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 WNT7AO00755 349 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 STX6O43752 255 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 SGPL1O95470 568 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 PGK1P00558 417 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 GJA8P48165 433 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 IRX5P78411 483 aaPredicted RBP21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 PRR16Q569H4 304 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 PLA2G4DQ86XP0 818 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 LENG9Q96B70 501 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 CDHR1Q96JP9 859 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 CRISPLD2Q9H0B8 497 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 KCNH7Q9NS40 1196 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 PKD2L1Q9P0L9 805 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 MTMR6Q9Y217 621 aa21.56■■□□□ 1.04
CLPTM1-209ENST00000588855 NKRFO15226 690 aaKnown RBP eCLIP21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 SORBS3O60504 671 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 ATP9AO75110 1047 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 TGFB3P10600 412 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 SETQ01105 290 aaPredicted RBP21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 MOXD1Q6UVY6 613 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 FERMT3Q86UX7 667 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 OR6J1Q8NGC5 347 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 BCAS3Q9H6U6 928 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 OGDHLQ9ULD0 1010 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 CYP3A7-CYP3A51PA0A087WV96 503 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 CCDC85CA6NKD9 419 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 DYNC1LI2O43237 492 aaPredicted RBP21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 CCNT1O60563 726 aaKnown RBP21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 ADAMTS4O75173 837 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 GGPS1O95749 300 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 KCNA2P16389 499 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 CYP3A7P24462 503 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 GJA9P57773 515 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 ARHGAP1Q07960 439 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 MBOAT7Q96N66 472 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 UIMC1Q96RL1 719 aa21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 UPF3AQ9H1J1 476 aaKnown RBP21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 AGO4Q9HCK5 861 aaKnown RBP21.55■■□□□ 1.04
CLPTM1-209ENST00000588855 MYADML2A6NDP7 307 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 MAFGO15525 162 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 SLC37A4O43826 429 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 GH1P01241 217 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 ATP2B1P20020 1258 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 Q4G0T1 1027 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 DDX25Q9UHL0 483 aaKnown RBP21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 Q9Y3F1 56 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 RBM19Q9Y4C8 960 aaKnown RBP21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 MYH15Q9Y2K3 1946 aa21.54■■□□□ 1.04
CLPTM1-209ENST00000588855 CTAGE5O15320 804 aa21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 TFRCP02786 760 aaKnown RBP21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 MYCNP04198 464 aaPredicted RBP21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 C6orf222P0C671 652 aaPredicted RBP21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 GCFC2P16383 781 aaKnown RBP21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 SOX10P56693 466 aa21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 PPP4R3AQ6IN85 833 aa21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 DHX37Q8IY37 1157 aaKnown RBP21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 NAP1L4Q99733 375 aaKnown RBP21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 SENP7Q9BQF6 1050 aa21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 AP5M1Q9H0R1 490 aa21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 DNAH12Q6ZR08 3092 aa21.53■■□□□ 1.04
CLPTM1-209ENST00000588855 MSH4O15457 936 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 BEX3Q00994 111 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 ITGB3BPQ13352 177 aaPredicted RBP21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 PKP1Q13835 747 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 NEDD9Q14511 834 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 LRRC41Q15345 812 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 CELF3Q5SZQ8 465 aaKnown RBP21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 MYSM1Q5VVJ2 828 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 CYFIP1Q7L576 1253 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 SPC25Q9HBM1 224 aa21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 NOL7Q9UMY1 257 aaKnown RBP21.52■■□□□ 1.04
CLPTM1-209ENST00000588855 MKI67P46013 3256 aaKnown RBP21.52■■□□□ 1.03
CLPTM1-209ENST00000588855 FARP2O94887 1054 aaPredicted RBP21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 EN2P19622 333 aaPredicted RBP21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 TOB1P50616 345 aaPredicted RBP21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 RESTQ13127 1097 aa21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 NBR1Q14596 966 aa21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 POTEDQ86YR6 584 aa21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 EMID1Q96A84 441 aaPredicted RBP21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 ZNF577Q9BSK1 485 aa21.51■■□□□ 1.03
CLPTM1-209ENST00000588855 MLXIPQ9HAP2 919 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms