RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 IMMTQ16891 758 aaKnown RBP21.46■■□□□ 1.03
CCDC43-204ENST00000588687 KIAA0753Q2KHM9 967 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 STOX1Q6ZVD7 989 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 GDPD5Q8WTR4 605 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 KATNAL1Q9BW62 490 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 AMNQ9BXJ7 453 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 VAT1LQ9HCJ6 419 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 COG5Q9UP83 839 aa21.46■■□□□ 1.03
CCDC43-204ENST00000588687 HOXC8P31273 242 aa21.45■■□□□ 1.02
CCDC43-204ENST00000588687 ZNF200P98182 395 aaPredicted RBP21.45■■□□□ 1.02
CCDC43-204ENST00000588687 HSDL1Q3SXM5 330 aa21.45■■□□□ 1.02
CCDC43-204ENST00000588687 MYSM1Q5VVJ2 828 aa21.45■■□□□ 1.02
CCDC43-204ENST00000588687 CYB5R4Q7L1T6 521 aa21.45■■□□□ 1.02
CCDC43-204ENST00000588687 C7orf31Q8N865 590 aa21.45■■□□□ 1.02
CCDC43-204ENST00000588687 ALG1Q9BT22 464 aa21.45■■□□□ 1.02
CCDC43-204ENST00000588687 KRT23Q9C075 422 aa21.45■■□□□ 1.02
CCDC43-204ENST00000588687 ABHD14A-ACY1A0A1B0GW23 586 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 PALM3A6NDB9 673 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-204ENST00000588687 HIP1O00291 1037 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 ZBTB5O15062 677 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 DHX16O60231 1041 aaKnown RBP21.44■■□□□ 1.02
CCDC43-204ENST00000588687 UBA1P22314 1058 aaKnown RBP21.44■■□□□ 1.02
CCDC43-204ENST00000588687 SP2Q02086 613 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 PGM5Q15124 567 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 IFIT1BQ5T764 474 aaKnown RBP21.44■■□□□ 1.02
CCDC43-204ENST00000588687 ZNF618Q5T7W0 954 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 VSIG10LQ86VR7 867 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 UBAC1Q9BSL1 405 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 C16orf70Q9BSU1 422 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 RWDD1Q9H446 243 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-204ENST00000588687 CNNM2Q9H8M5 875 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 BAZ2BQ9UIF8 2168 aaKnown RBP21.44■■□□□ 1.02
CCDC43-204ENST00000588687 COL4A6Q14031 1691 aa21.44■■□□□ 1.02
CCDC43-204ENST00000588687 LINC01553A4QN01 128 aa21.43■■□□□ 1.02
CCDC43-204ENST00000588687 KLRF2D3W0D1 207 aa21.43■■□□□ 1.02
CCDC43-204ENST00000588687 HOXA13P31271 388 aaPredicted RBP21.43■■□□□ 1.02
CCDC43-204ENST00000588687 CELF3Q5SZQ8 465 aaKnown RBP21.43■■□□□ 1.02
CCDC43-204ENST00000588687 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
CCDC43-204ENST00000588687 GPKOWQ92917 476 aaPredicted RBP eCLIP21.43■■□□□ 1.02
CCDC43-204ENST00000588687 MAP3K20Q9NYL2 800 aaKnown RBP21.43■■□□□ 1.02
CCDC43-204ENST00000588687 CTNNA3Q9UI47 895 aa21.43■■□□□ 1.02
CCDC43-204ENST00000588687 DOCK5Q9H7D0 1870 aa21.43■■□□□ 1.02
CCDC43-204ENST00000588687 ERVK-21P61565 698 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 FRMPD4Q14CM0 1322 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 SERINC5Q86VE9 423 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 HLA-CQ95604 372 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 RAD9AQ99638 391 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 SUGCTQ9HAC7 445 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 LMCD1Q9NZU5 365 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 PCDHA1Q9Y5I3 950 aa21.42■■□□□ 1.02
CCDC43-204ENST00000588687 CYTH3O43739 400 aa21.41■■□□□ 1.02
CCDC43-204ENST00000588687 PPFIA4O75335 1185 aa21.41■■□□□ 1.02
CCDC43-204ENST00000588687 GGPS1O95749 300 aa21.41■■□□□ 1.02
CCDC43-204ENST00000588687 SPATA33Q96N06 139 aa21.41■■□□□ 1.02
CCDC43-204ENST00000588687 RIOX1Q9H6W3 641 aa21.41■■□□□ 1.02
CCDC43-204ENST00000588687 SENP2Q9HC62 589 aa21.41■■□□□ 1.02
CCDC43-204ENST00000588687 SORBS3O60504 671 aa21.4■■□□□ 1.02
CCDC43-204ENST00000588687 EFCAB14O75071 495 aa21.4■■□□□ 1.02
CCDC43-204ENST00000588687 MYCLP12524 364 aaPredicted RBP21.4■■□□□ 1.02
CCDC43-204ENST00000588687 GSPT1P15170 499 aaKnown RBP21.4■■□□□ 1.02
CCDC43-204ENST00000588687 GRM4Q14833 912 aa21.4■■□□□ 1.02
CCDC43-204ENST00000588687 KCNV1Q6PIU1 500 aa21.4■■□□□ 1.02
CCDC43-204ENST00000588687 SAMD3Q8N6K7 520 aa21.4■■□□□ 1.02
CCDC43-204ENST00000588687 BCAS3Q9H6U6 928 aa21.4■■□□□ 1.02
CCDC43-204ENST00000588687 TAF6LQ9Y6J9 622 aa21.4■■□□□ 1.02
CCDC43-204ENST00000588687 LGR5O75473 907 aa21.39■■□□□ 1.01
CCDC43-204ENST00000588687 IKBKEQ14164 716 aa21.39■■□□□ 1.01
CCDC43-204ENST00000588687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.39■■□□□ 1.017e-6■□□□□ 10.9
CCDC43-204ENST00000588687 SP7Q8TDD2 431 aaPredicted RBP21.39■■□□□ 1.01
CCDC43-204ENST00000588687 KHSRPQ92945 711 aaKnown RBP eCLIP21.39■■□□□ 1.01
CCDC43-204ENST00000588687 ZFP91Q96JP5 570 aaPredicted RBP21.39■■□□□ 1.01
CCDC43-204ENST00000588687 TGS1Q96RS0 853 aaKnown RBP21.39■■□□□ 1.01
CCDC43-204ENST00000588687 PIGSQ96S52 555 aa21.39■■□□□ 1.01
CCDC43-204ENST00000588687 ZBED2Q9BTP6 218 aa21.39■■□□□ 1.01
CCDC43-204ENST00000588687 C1QTNF1Q9BXJ1 281 aa21.39■■□□□ 1.01
CCDC43-204ENST00000588687 MTUS1Q9ULD2 1270 aa21.39■■□□□ 1.01
CCDC43-204ENST00000588687 ATG2AQ2TAZ0 1938 aa21.39■■□□□ 1.01
CCDC43-204ENST00000588687 EMSYQ7Z589 1322 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 TGFB3P10600 412 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 HTRA4P83105 476 aaPredicted RBP21.38■■□□□ 1.01
CCDC43-204ENST00000588687 TROAPQ12815 778 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 SEMA3FQ13275 785 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 HOMER1Q86YM7 354 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 EXOC6Q8TAG9 804 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 OSBPL7Q9BZF2 842 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 C5orf42Q9H799 3197 aa21.38■■□□□ 1.01
CCDC43-204ENST00000588687 NLRC5Q86WI3 1866 aa21.37■■□□□ 1.01
CCDC43-204ENST00000588687 CYP21A2P08686 494 aa21.37■■□□□ 1.01
CCDC43-204ENST00000588687 PDE4AP27815 886 aa21.37■■□□□ 1.01
CCDC43-204ENST00000588687 PLA2G5P39877 138 aa21.37■■□□□ 1.01
CCDC43-204ENST00000588687 MRPS9P82933 396 aaKnown RBP21.37■■□□□ 1.01
CCDC43-204ENST00000588687 PLEKHG4Q58EX7 1191 aa21.37■■□□□ 1.01
CCDC43-204ENST00000588687 DBF4BQ8NFT6 615 aa21.37■■□□□ 1.01
CCDC43-204ENST00000588687 INPP4AQ96PE3 977 aaPredicted RBP21.37■■□□□ 1.01
CCDC43-204ENST00000588687 EPHX3Q9H6B9 360 aa21.37■■□□□ 1.01
CCDC43-204ENST00000588687 GCOM1H8Y6P7 765 aaPredicted RBP21.36■■□□□ 1.01
CCDC43-204ENST00000588687 LGALS2P05162 132 aa21.36■■□□□ 1.01
CCDC43-204ENST00000588687 POLR2MP0CAP2 368 aa21.36■■□□□ 1.01
CCDC43-204ENST00000588687 CCND2P30279 289 aa21.36■■□□□ 1.01
CCDC43-204ENST00000588687 FAM117BQ6P1L5 589 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms