RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 GRM4Q14833 912 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 CT47A1Q5JQC4 288 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-203ENST00000588210 COL13A1Q5TAT6 717 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-203ENST00000588210 OXER1Q8TDS5 423 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 NUP133Q8WUM0 1156 aa16.45■□□□□ 0.22
CCDC43-203ENST00000588210 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-203ENST00000588210 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-203ENST00000588210 COPB2P35606 906 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 SPECC1LQ69YQ0 1117 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 RIOX2Q8IUF8 465 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
CCDC43-203ENST00000588210 LRRN4CLQ8ND94 238 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 TEX13BQ9BXU2 312 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 STX10O60499 249 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 KIF20AO95235 890 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 XBP1P17861 261 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 ERCC5P28715 1186 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-203ENST00000588210 ERCC6LQ2NKX8 1250 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-203ENST00000588210 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 RANBP17Q9H2T7 1088 aaKnown RBP16.44■□□□□ 0.22
CCDC43-203ENST00000588210 MROH8Q9H579 483 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 SRRDQ9UH36 339 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 PPP2R2CQ9Y2T4 447 aa16.44■□□□□ 0.22
CCDC43-203ENST00000588210 ZSWIM8A7E2V4 1837 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 VWA3AA6NCI4 1184 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 ERCC3P19447 782 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 KIF5BP33176 963 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 GOLGA8FQ08AF8 430 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 GOLGA8DPQ0D2H9 430 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 GPR142Q7Z601 462 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 PLEKHH3Q7Z736 793 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 CPXCR1Q8N123 301 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 STAG2Q8N3U4 1231 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 TC2NQ8N9U0 490 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
CCDC43-203ENST00000588210 SHISA4Q96DD7 197 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 CCDC34Q96HJ3 373 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 PHF20Q9BVI0 1012 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 UBA5Q9GZZ9 404 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
CCDC43-203ENST00000588210 PTPN22Q9Y2R2 807 aa16.43■□□□□ 0.22
CCDC43-203ENST00000588210 FANCGO15287 622 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 KRT2P35908 639 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
CCDC43-203ENST00000588210 FUT2Q10981 343 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
CCDC43-203ENST00000588210 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 GRAMD1CQ8IYS0 662 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 MED15Q96RN5 788 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 PRPF3O43395 683 aaKnown RBP16.42■□□□□ 0.22
CCDC43-203ENST00000588210 STRNO43815 780 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 BMP15O95972 392 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 CDK11BP21127 795 aaKnown RBP16.42■□□□□ 0.22
CCDC43-203ENST00000588210 PKN1Q16512 942 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 WDR78Q5VTH9 848 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-203ENST00000588210 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
CCDC43-203ENST00000588210 ADGRF4Q8IZF3 695 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
CCDC43-203ENST00000588210 ZNF446Q9NWS9 450 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 PNMA2Q9UL42 364 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 IVNS1ABPQ9Y6Y0 642 aa16.42■□□□□ 0.22
CCDC43-203ENST00000588210 ZNF536O15090 1300 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 A0A1B0GTH6 734 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 PTPN21Q16825 1174 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 USP49Q70CQ1 688 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 SH3RF1Q7Z6J0 888 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 PDILTQ8N807 584 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 SOCS4Q8WXH5 440 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 CPVLQ9H3G5 476 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 TADA3O75528 432 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 ICAM1P05362 532 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 GNAQP50148 359 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 PRKCZQ05513 592 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 NR1I3Q14994 352 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 CCDC174Q6PII3 467 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 FERMT2Q96AC1 680 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 NUDT12Q9BQG2 462 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 MCOLN1Q9GZU1 580 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
CCDC43-203ENST00000588210 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
CCDC43-203ENST00000588210 SLFN14P0C7P3 912 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 SMARCA1P28370 1054 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 FLT3LGP49771 235 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 SNAP25P60880 206 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 ARHGAP29Q52LW3 1261 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 HSP90AA4PQ58FG1 418 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 AGBL1Q96MI9 1066 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 JMJD4Q9H9V9 463 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 FBXO40Q9UH90 709 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 GABRQQ9UN88 632 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 DOCK3Q8IZD9 2030 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms