RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SETQ01105 290 aaPredicted RBP12.77□□□□□ -0.37
VMP1-207ENST00000588131 XRRA1Q6P2D8 792 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 NIPA1Q7RTP0 329 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 IGSF22Q8N9C0 903 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 SLC5A5Q92911 643 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.37
VMP1-207ENST00000588131 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 COBLO75128 1261 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 RGS20O76081 388 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 EDNRBP24530 442 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 ADORA2AP29274 412 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 MAPK4P31152 587 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 SYKP43405 635 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 SEMA3FQ13275 785 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 GRB14Q14449 540 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 TMEM266Q2M3C6 531 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 ZNF792Q3KQV3 632 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 AK8Q96MA6 479 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 FAM20AQ96MK3 541 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 INPP4AQ96PE3 977 aaPredicted RBP12.76□□□□□ -0.37
VMP1-207ENST00000588131 IWS1Q96ST2 819 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 ZNF577Q9BSK1 485 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
VMP1-207ENST00000588131 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
VMP1-207ENST00000588131 KCNH7Q9NS40 1196 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 DDX19AQ9NUU7 478 aaKnown RBP12.76□□□□□ -0.37
VMP1-207ENST00000588131 PKD2L1Q9P0L9 805 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
VMP1-207ENST00000588131 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 KCNH3Q9ULD8 1083 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 PCDHA12Q9UN75 941 aa12.76□□□□□ -0.37
VMP1-207ENST00000588131 STRNO43815 780 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 PSMD10O75832 226 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 ZNF202O95125 648 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 ALDH1A1P00352 501 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 MTMR1Q13613 665 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
VMP1-207ENST00000588131 STXBP2Q15833 593 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 CCDC183Q5T5S1 534 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 CABP7Q86V35 215 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
VMP1-207ENST00000588131 PDILTQ8N807 584 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 MMTAG2Q9BU76 263 aaKnown RBP12.75□□□□□ -0.37
VMP1-207ENST00000588131 CCSER1Q9C0I3 900 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 CLSTN2Q9H4D0 955 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 IVNS1ABPQ9Y6Y0 642 aa12.75□□□□□ -0.37
VMP1-207ENST00000588131 MGAMO43451 1857 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 SLC15A5A6NIM6 579 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
VMP1-207ENST00000588131 POLR2DO15514 142 aaKnown RBP12.74□□□□□ -0.37
VMP1-207ENST00000588131 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
VMP1-207ENST00000588131 KINO60870 393 aaKnown RBP12.74□□□□□ -0.37
VMP1-207ENST00000588131 ATP9AO75110 1047 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 STAM2O75886 525 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 CTGFP29279 349 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 UBA7P41226 1012 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 PDE4DQ08499 809 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 ITGB3BPQ13352 177 aaPredicted RBP12.74□□□□□ -0.37
VMP1-207ENST00000588131 PDIA5Q14554 519 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 CAMK4Q16566 473 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 LRCH2Q5VUJ6 765 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 GPRASP2Q96D09 838 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 SERTAD1Q9UHV2 236 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 KIAA1217Q5T5P2 1943 aa12.74□□□□□ -0.37
VMP1-207ENST00000588131 SPATA31C2B4DYI2 1134 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
VMP1-207ENST00000588131 EML1O00423 815 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 ACTN4O43707 911 aaKnown RBP12.73□□□□□ -0.37
VMP1-207ENST00000588131 GAS7O60861 476 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 EIF3JO75822 258 aaKnown RBP12.73□□□□□ -0.37
VMP1-207ENST00000588131 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 MAP2K2P36507 400 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 TXLNAP40222 546 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 E2F4Q16254 413 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 ZSCAN23Q3MJ62 389 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 MORN1Q5T089 497 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 EEPD1Q7L9B9 569 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 OTOP1Q7RTM1 612 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 NPLOC4Q8TAT6 608 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 MORC4Q8TE76 937 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 SNX29Q8TEQ0 813 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 LRRC15Q8TF66 581 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 SYAP1Q96A49 352 aaPredicted RBP12.73□□□□□ -0.37
VMP1-207ENST00000588131 DHX58Q96C10 678 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 TIGD1Q96MW7 591 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
VMP1-207ENST00000588131 PLIN2Q99541 437 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms