RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CHD9Q3L8U1 2897 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 TANC1Q9C0D5 1861 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 ERICH2A1L162 156 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 LCHNA4D1U4 455 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 GCOM1H8Y6P7 765 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-205ENST00000587888 HAS3O00219 553 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 PPFIA4O75335 1185 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 PARNO95453 639 aaKnown RBP16.42■□□□□ 0.22
ERCC1-205ENST00000587888 POLR2MP0CAP2 368 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 BMP1P13497 986 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
ERCC1-205ENST00000587888 POU3F3P20264 500 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-205ENST00000587888 KCNQ1P51787 676 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 PTK7Q13308 1070 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 GRM4Q14833 912 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 SLC35G1Q2M3R5 365 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 HSDL1Q3SXM5 330 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 ZNF618Q5T7W0 954 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 KCNV1Q6PIU1 500 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 IL31RAQ8NI17 732 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 RUFY2Q8WXA3 655 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
ERCC1-205ENST00000587888 WNT8BQ93098 351 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 NECAB3Q96P71 396 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-205ENST00000587888 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
ERCC1-205ENST00000587888 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-205ENST00000587888 TCF20Q9UGU0 1960 aaKnown RBP16.41■□□□□ 0.22
ERCC1-205ENST00000587888 F2P00734 622 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 CYP21A2P08686 494 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 CCND2P30279 289 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 GHRHRQ02643 423 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 TRAF1Q13077 416 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 GRB10Q13322 594 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 IKBKEQ14164 716 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 HIC1Q14526 733 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 WTAPQ15007 396 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 AAK1Q2M2I8 961 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 FAM117BQ6P1L5 589 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 SAMD3Q8N6K7 520 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
ERCC1-205ENST00000587888 PNMA6FA0A0J9YX94 578 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 ABHD14A-ACY1A0A1B0GW23 586 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 CYTH3O43739 400 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 CXCL10P02778 98 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 TGFB3P10600 412 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 CHMLP26374 656 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 RBL2Q08999 1139 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
ERCC1-205ENST00000587888 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
ERCC1-205ENST00000587888 C16orf70Q9BSU1 422 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
ERCC1-205ENST00000587888 E7EWF7 191 aa16.39■□□□□ 0.21
ERCC1-205ENST00000587888 COL9A1P20849 921 aa16.39■□□□□ 0.21
ERCC1-205ENST00000587888 UBA1P22314 1058 aaKnown RBP16.39■□□□□ 0.21
ERCC1-205ENST00000587888 THPOP40225 353 aa16.39■□□□□ 0.21
ERCC1-205ENST00000587888 TRAF7Q6Q0C0 670 aa16.39■□□□□ 0.21
ERCC1-205ENST00000587888 NCOA7Q8NI08 942 aa16.39■□□□□ 0.21
ERCC1-205ENST00000587888 RAD9AQ99638 391 aa16.39■□□□□ 0.21
ERCC1-205ENST00000587888 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
ERCC1-205ENST00000587888 VCANP13611 3396 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 C17orf102A2RUQ5 167 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 H3BRB1 525 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 LPXNO60711 386 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 GJB5O95377 273 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 HOXD8P13378 290 aaPredicted RBP16.38■□□□□ 0.21
ERCC1-205ENST00000587888 TROAPQ12815 778 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
ERCC1-205ENST00000587888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.38■□□□□ 0.21
ERCC1-205ENST00000587888 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 GDPD5Q8WTR4 605 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 ATP6V0A1Q93050 837 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 TUT1Q9H6E5 874 aaKnown RBP16.38■□□□□ 0.21
ERCC1-205ENST00000587888 COG5Q9UP83 839 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 PTPRSQ13332 1948 aa16.38■□□□□ 0.21
ERCC1-205ENST00000587888 RSPH10B2B2RC85 870 aa16.37■□□□□ 0.21
ERCC1-205ENST00000587888 NOP56O00567 594 aaKnown RBP16.37■□□□□ 0.21
ERCC1-205ENST00000587888 LGR5O75473 907 aa16.37■□□□□ 0.21
ERCC1-205ENST00000587888 RSPH10BP0C881 870 aa16.37■□□□□ 0.21
ERCC1-205ENST00000587888 SERINC5Q86VE9 423 aa16.37■□□□□ 0.21
ERCC1-205ENST00000587888 DBF4BQ8NFT6 615 aa16.37■□□□□ 0.21
ERCC1-205ENST00000587888 HLA-CQ95604 372 aa16.37■□□□□ 0.21
ERCC1-205ENST00000587888 RAPGEFL1Q9UHV5 662 aa16.37■□□□□ 0.21
ERCC1-205ENST00000587888 BAZ2BQ9UIF8 2168 aaKnown RBP16.36■□□□□ 0.21
ERCC1-205ENST00000587888 EFCAB14O75071 495 aa16.36■□□□□ 0.21
ERCC1-205ENST00000587888 LGALS2P05162 132 aa16.36■□□□□ 0.21
ERCC1-205ENST00000587888 SMIM10L2AP0DMW4 78 aa16.36■□□□□ 0.21
ERCC1-205ENST00000587888 SMIM10L2BP0DMW5 78 aa16.36■□□□□ 0.21
ERCC1-205ENST00000587888 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-205ENST00000587888 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
ERCC1-205ENST00000587888 CYFIP1Q7L576 1253 aa16.36■□□□□ 0.21
ERCC1-205ENST00000587888 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
ERCC1-205ENST00000587888 TGS1Q96RS0 853 aaKnown RBP16.36■□□□□ 0.21
ERCC1-205ENST00000587888 RNPEPQ9H4A4 650 aa16.36■□□□□ 0.21
ERCC1-205ENST00000587888 SUGCTQ9HAC7 445 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms