RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
NFIX-208ENST00000587260 SRRDQ9UH36 339 aa16.9■□□□□ 0.3
NFIX-208ENST00000587260 MRVI1Q9Y6F6 885 aa16.9■□□□□ 0.3
NFIX-208ENST00000587260 IGLV3-22A0A075B6J6 115 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 B4DLN1 442 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 HSPA8P11142 646 aaKnown RBP16.89■□□□□ 0.29
NFIX-208ENST00000587260 KLHL40Q2TBA0 621 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 Q4G0T1 1027 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 CEP55Q53EZ4 464 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
NFIX-208ENST00000587260 MTMR9Q96QG7 549 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 MXRA8Q9BRK3 442 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 WDR11Q9BZH6 1224 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 PKD2L1Q9P0L9 805 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 TRIM17Q9Y577 477 aa16.89■□□□□ 0.29
NFIX-208ENST00000587260 TRAK2O60296 914 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 CMA1P23946 247 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 HOXD10P28358 340 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 MTMR1Q13613 665 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 XRRA1Q6P2D8 792 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 PLA2G4DQ86XP0 818 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 TRIB2Q92519 343 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 LENG9Q96B70 501 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 TINF2Q9BSI4 451 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 TMEM60Q9H2L4 133 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.88■□□□□ 0.29
NFIX-208ENST00000587260 UBIAD1Q9Y5Z9 338 aa16.88■□□□□ 0.29
NFIX-208ENST00000587260 FAM237AA0A1B0GTK4 181 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 TBX3O15119 743 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 RGS20O76081 388 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 GNRH1P01148 92 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 OR52Z1P0C646 297 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 CYP2C19P33261 490 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 SETQ01105 290 aaPredicted RBP16.87■□□□□ 0.29
NFIX-208ENST00000587260 ARHGEF6Q15052 776 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 CALCRLQ16602 461 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 MAMDC4Q6UXC1 1216 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 SEPT14Q6ZU15 432 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 OTOP1Q7RTM1 612 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 RAET1EQ8TD07 263 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 MORC4Q8TE76 937 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 GJA10Q969M2 543 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 SYNGAP1Q96PV0 1343 aa16.87■□□□□ 0.29
NFIX-208ENST00000587260 LOC102724159A0A0B4J2E5 919 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 EIF3JO75822 258 aaKnown RBP16.86■□□□□ 0.29
NFIX-208ENST00000587260 ARP10275 920 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 XRCC5P13010 732 aaKnown RBP16.86■□□□□ 0.29
NFIX-208ENST00000587260 ELNP15502 786 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 LBX1P52954 281 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 PWP2Q15269 919 aaKnown RBP16.86■□□□□ 0.29
NFIX-208ENST00000587260 GNPTABQ3T906 1256 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 OLFML2BQ68BL8 750 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 NLRX1Q86UT6 975 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 INPP4AQ96PE3 977 aaPredicted RBP16.86■□□□□ 0.29
NFIX-208ENST00000587260 KCNMB3Q9NPA1 279 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 ZHX1Q9UKY1 873 aaPredicted RBP16.86■□□□□ 0.29
NFIX-208ENST00000587260 MEIS1O00470 390 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 MSH4O15457 936 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 STAM2O75886 525 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 SNAI1O95863 264 aaPredicted RBP16.86■□□□□ 0.29
NFIX-208ENST00000587260 IL17AQ16552 155 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 RESP18Q5W5W9 173 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 DTHD1Q6ZMT9 781 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 MRPS27Q92552 414 aaKnown RBP16.86■□□□□ 0.29
NFIX-208ENST00000587260 CLIC6Q96NY7 704 aa16.86■□□□□ 0.29
NFIX-208ENST00000587260 MARCH6O60337 910 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 LONP1P36776 959 aaKnown RBP16.85■□□□□ 0.29
NFIX-208ENST00000587260 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
NFIX-208ENST00000587260 GRIN1Q05586 938 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 SEMA3FQ13275 785 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 IRF5Q13568 498 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 PRAMEF19Q5SWL8 479 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 MSL3Q8N5Y2 521 aaKnown RBP16.85■□□□□ 0.29
NFIX-208ENST00000587260 ETNPPLQ8TBG4 499 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 HAS1Q92839 578 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 GPRASP2Q96D09 838 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 ZNF577Q9BSK1 485 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 CSRNP2Q9H175 543 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 VTA1Q9NP79 307 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 PDGFCQ9NRA1 345 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 KCNH7Q9NS40 1196 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 PTCH2Q9Y6C5 1203 aa16.85■□□□□ 0.29
NFIX-208ENST00000587260 HTTP42858 3142 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 ADCY3O60266 1144 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 SORBS3O60504 671 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
NFIX-208ENST00000587260 TRIM32Q13049 653 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 PDIA5Q14554 519 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 SLFN12Q8IYM2 578 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 ENGASEQ8NFI3 743 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 AK8Q96MA6 479 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 FAM20AQ96MK3 541 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 KATNBL1Q9H079 304 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 AGO4Q9HCK5 861 aaKnown RBP16.84■□□□□ 0.29
NFIX-208ENST00000587260 HPSEQ9Y251 543 aa16.84■□□□□ 0.29
NFIX-208ENST00000587260 VWA3AA6NCI4 1184 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms