RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 TANC1Q9C0D5 1861 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 PRUNE2Q8WUY3 3088 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 STAM2O75886 525 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 RGS20O76081 388 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 F2P00734 622 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 IQCF3P0C7M6 154 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 ATP2A2P16615 1042 aaKnown RBP12.29□□□□□ -0.44
ZNF540-205ENST00000587220 RXRAP19793 462 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 SMARCA1P28370 1054 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 LIFRP42702 1097 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 PSEN2P49810 448 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 MFSD10Q14728 455 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 NECTIN1Q15223 517 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 KIAA0753Q2KHM9 967 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 CELF3Q5SZQ8 465 aaKnown RBP12.29□□□□□ -0.44
ZNF540-205ENST00000587220 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 GDF6Q6KF10 455 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-205ENST00000587220 SESTD1Q86VW0 696 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 SKAP1Q86WV1 359 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
ZNF540-205ENST00000587220 CAGE1Q8TC20 777 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 KAT2BQ92831 832 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 GAS2L1Q99501 681 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-205ENST00000587220 LRRC2Q9BYS8 371 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 GBF1Q92538 1859 aa12.29□□□□□ -0.44
ZNF540-205ENST00000587220 SCN5AQ14524 2016 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 CDC45O75419 566 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 PLEKHA8P1O95397 391 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 UBA1P22314 1058 aaKnown RBP12.28□□□□□ -0.44
ZNF540-205ENST00000587220 HSDL1Q3SXM5 330 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 MICU3Q86XE3 530 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 RAB11FIP4Q86YS3 637 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 CCDC82Q8N4S0 544 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 AFAP1L1Q8TED9 768 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 NKX2-4Q9H2Z4 354 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 GTF2IRD1Q9UHL9 959 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
ZNF540-205ENST00000587220 FIBPO43427 364 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 RABGGTBP53611 331 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 FGD1P98174 961 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 NEDD9Q14511 834 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 PPP2R2DQ66LE6 453 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 LRRC8DQ7L1W4 858 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 HEATR3Q7Z4Q2 680 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 SRBD1Q8N5C6 995 aaKnown RBP12.27□□□□□ -0.45
ZNF540-205ENST00000587220 FANCBQ8NB91 859 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 NEK1Q96PY6 1258 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 PRDM12Q9H4Q4 367 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 PSTPIP2Q9H939 334 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 FRMPD4Q14CM0 1322 aa12.27□□□□□ -0.45
ZNF540-205ENST00000587220 hCG_1642624A0A1W2PR95 340 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 SPDYE3A6NKU9 549 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 PIK3CDO00329 1044 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
ZNF540-205ENST00000587220 SELPP16109 830 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 KCNJ6P48051 423 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 MRPS9P82933 396 aaKnown RBP12.26□□□□□ -0.45
ZNF540-205ENST00000587220 SP2Q02086 613 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 KRT32Q14532 448 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 PCNX4Q63HM2 1172 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 XRRA1Q6P2D8 792 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 TMTC3Q6ZXV5 915 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 NLRX1Q86UT6 975 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
ZNF540-205ENST00000587220 INPP4AQ96PE3 977 aaPredicted RBP12.26□□□□□ -0.45
ZNF540-205ENST00000587220 SLC9A7Q96T83 725 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 YBX2Q9Y2T7 364 aaKnown RBP12.26□□□□□ -0.45
ZNF540-205ENST00000587220 PCDHA11Q9Y5I1 949 aa12.26□□□□□ -0.45
ZNF540-205ENST00000587220 TRIP12Q14669 1992 aaPredicted RBP12.26□□□□□ -0.45
ZNF540-205ENST00000587220 SPATA31C2B4DYI2 1134 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 KIF28PB7ZC32 967 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 H3BRB1 525 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 HAS3O00219 553 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 MEIS2O14770 477 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 ZBTB43O43298 467 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 BAIAP3O94812 1187 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 CKBP12277 381 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 HOXD8P13378 290 aaPredicted RBP12.25□□□□□ -0.45
ZNF540-205ENST00000587220 IGFBP4P22692 258 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 ICAM3P32942 547 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 SP4Q02446 784 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 PTK7Q13308 1070 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 METTL7BQ6UX53 244 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 CYFIP1Q7L576 1253 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 DHX32Q7L7V1 743 aaKnown RBP12.25□□□□□ -0.45
ZNF540-205ENST00000587220 SGMS1Q86VZ5 419 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 GIMAP8Q8ND71 665 aaPredicted RBP12.25□□□□□ -0.45
ZNF540-205ENST00000587220 PPM1EQ8WY54 764 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 TUT1Q9H6E5 874 aaKnown RBP12.25□□□□□ -0.45
ZNF540-205ENST00000587220 EHMT1Q9H9B1 1298 aa12.25□□□□□ -0.45
ZNF540-205ENST00000587220 RBM28Q9NW13 759 aaKnown RBP12.25□□□□□ -0.45
ZNF540-205ENST00000587220 ZNF215Q9UL58 517 aaPredicted RBP12.25□□□□□ -0.45
ZNF540-205ENST00000587220 NAP1L2Q9ULW6 460 aaPredicted RBP12.25□□□□□ -0.45
ZNF540-205ENST00000587220 LGALS2P05162 132 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 HMGB1P09429 215 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms