RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 LAMA4Q16363 1823 aa19.04■□□□□ 0.64
NPC1-205ENST00000587163 HSD17B4P51659 736 aa19.04■□□□□ 0.64
NPC1-205ENST00000587163 IKBKEQ14164 716 aa19.04■□□□□ 0.64
NPC1-205ENST00000587163 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
NPC1-205ENST00000587163 DHX37Q8IY37 1157 aaKnown RBP19.04■□□□□ 0.64
NPC1-205ENST00000587163 STAG2Q8N3U4 1231 aa19.04■□□□□ 0.64
NPC1-205ENST00000587163 KATNAL1Q9BW62 490 aa19.04■□□□□ 0.64
NPC1-205ENST00000587163 PPP1R11O60927 126 aaPredicted RBP19.03■□□□□ 0.64
NPC1-205ENST00000587163 MYCLP12524 364 aaPredicted RBP19.03■□□□□ 0.64
NPC1-205ENST00000587163 HOXD8P13378 290 aaPredicted RBP19.03■□□□□ 0.64
NPC1-205ENST00000587163 SP2Q02086 613 aa19.03■□□□□ 0.64
NPC1-205ENST00000587163 HSDL1Q3SXM5 330 aa19.03■□□□□ 0.64
NPC1-205ENST00000587163 MYSM1Q5VVJ2 828 aa19.03■□□□□ 0.64
NPC1-205ENST00000587163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.03■□□□□ 0.647e-7■■□□□ 14.1
NPC1-205ENST00000587163 PLEKHM2Q8IWE5 1019 aa19.03■□□□□ 0.64
NPC1-205ENST00000587163 TGS1Q96RS0 853 aaKnown RBP19.03■□□□□ 0.64
NPC1-205ENST00000587163 NT5C2P49902 561 aa19.02■□□□□ 0.64
NPC1-205ENST00000587163 GHRHRQ02643 423 aa19.02■□□□□ 0.64
NPC1-205ENST00000587163 CELF3Q5SZQ8 465 aaKnown RBP19.02■□□□□ 0.64
NPC1-205ENST00000587163 IL31RAQ8NI17 732 aa19.02■□□□□ 0.64
NPC1-205ENST00000587163 ZFP91Q96JP5 570 aaPredicted RBP19.02■□□□□ 0.64
NPC1-205ENST00000587163 PDCD2LQ9BRP1 358 aa19.02■□□□□ 0.64
NPC1-205ENST00000587163 AMNQ9BXJ7 453 aa19.02■□□□□ 0.64
NPC1-205ENST00000587163 C11orf16Q9NQ32 467 aa19.02■□□□□ 0.64
NPC1-205ENST00000587163 BRWD1Q9NSI6 2320 aa19.02■□□□□ 0.64
NPC1-205ENST00000587163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.01■□□□□ 0.63
NPC1-205ENST00000587163 EFCAB14O75071 495 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 PPFIA4O75335 1185 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 LGR5O75473 907 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 HOXA13P31271 388 aaPredicted RBP19.01■□□□□ 0.63
NPC1-205ENST00000587163 MKRN4PQ13434 485 aaPredicted RBP19.01■□□□□ 0.63
NPC1-205ENST00000587163 STOX1Q6ZVD7 989 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 VSIG10LQ86VR7 867 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 GPKOWQ92917 476 aaPredicted RBP eCLIP19.01■□□□□ 0.63
NPC1-205ENST00000587163 MTMR8Q96EF0 704 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 C17orf80Q9BSJ5 609 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 C16orf70Q9BSU1 422 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 OSBPL3Q9H4L5 887 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 BCAS3Q9H6U6 928 aa19.01■□□□□ 0.63
NPC1-205ENST00000587163 SIP14410 1827 aa19■□□□□ 0.63
NPC1-205ENST00000587163 GGPS1O95749 300 aa19■□□□□ 0.63
NPC1-205ENST00000587163 PGM5Q15124 567 aa19■□□□□ 0.63
NPC1-205ENST00000587163 TMEM31Q5JXX7 168 aa19■□□□□ 0.63
NPC1-205ENST00000587163 SERINC5Q86VE9 423 aa19■□□□□ 0.63
NPC1-205ENST00000587163 DBF4BQ8NFT6 615 aa19■□□□□ 0.63
NPC1-205ENST00000587163 SPATA33Q96N06 139 aa19■□□□□ 0.63
NPC1-205ENST00000587163 DSCC1Q9BVC3 393 aa19■□□□□ 0.63
NPC1-205ENST00000587163 UBE2ZQ9H832 354 aaPredicted RBP19■□□□□ 0.63
NPC1-205ENST00000587163 PCDHA1Q9Y5I3 950 aa19■□□□□ 0.63
NPC1-205ENST00000587163 FAM86C2PA6NEL3 165 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 KLRF2D3W0D1 207 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 THPOP40225 353 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 SEC23AQ15436 765 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 IMMTQ16891 758 aaKnown RBP18.99■□□□□ 0.63
NPC1-205ENST00000587163 SLC35G1Q2M3R5 365 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 CHD1LQ86WJ1 897 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 UBAC1Q9BSL1 405 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 OSBPL7Q9BZF2 842 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 KRT23Q9C075 422 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 DIAPH3Q9NSV4 1193 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 MAD2L2Q9UI95 211 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 INSL6Q9Y581 213 aa18.99■□□□□ 0.63
NPC1-205ENST00000587163 PALM3A6NDB9 673 aaPredicted RBP18.98■□□□□ 0.63
NPC1-205ENST00000587163 RSPH10B2B2RC85 870 aa18.98■□□□□ 0.63
NPC1-205ENST00000587163 GPR37L1O60883 481 aa18.98■□□□□ 0.63
NPC1-205ENST00000587163 IGHDP01880 384 aa18.98■□□□□ 0.63
NPC1-205ENST00000587163 RSPH10BP0C881 870 aa18.98■□□□□ 0.63
NPC1-205ENST00000587163 UBA1P22314 1058 aaKnown RBP18.98■□□□□ 0.63
NPC1-205ENST00000587163 HTRA4P83105 476 aaPredicted RBP18.98■□□□□ 0.63
NPC1-205ENST00000587163 IFIT1BQ5T764 474 aaKnown RBP18.98■□□□□ 0.63
NPC1-205ENST00000587163 KCNV1Q6PIU1 500 aa18.98■□□□□ 0.63
NPC1-205ENST00000587163 FBXO22Q8NEZ5 403 aa18.98■□□□□ 0.63
NPC1-205ENST00000587163 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.98■□□□□ 0.63
NPC1-205ENST00000587163 IL25Q9H293 177 aa18.98■□□□□ 0.63
NPC1-205ENST00000587163 MAP3K20Q9NYL2 800 aaKnown RBP18.98■□□□□ 0.63
NPC1-205ENST00000587163 PI4K2BG5E9Z4 385 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 ZBTB5O15062 677 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
NPC1-205ENST00000587163 LEXMQ3ZCV2 418 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 PLEKHG4Q58EX7 1191 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 CYB5R4Q7L1T6 521 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 MYOCDQ8IZQ8 938 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 SP7Q8TDD2 431 aaPredicted RBP18.97■□□□□ 0.63
NPC1-205ENST00000587163 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 EMSYQ7Z589 1322 aa18.97■□□□□ 0.63
NPC1-205ENST00000587163 H3BRB1 525 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 TREHO43280 583 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 AMHP03971 560 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 TGFB3P10600 412 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 KCNA5P22460 613 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 HOXC8P31273 242 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 NUCB1Q02818 461 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 FCHSD1Q86WN1 690 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 FAM178BQ8IXR5 827 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
NPC1-205ENST00000587163 RNPEPQ9H4A4 650 aa18.96■□□□□ 0.63
NPC1-205ENST00000587163 TUT1Q9H6E5 874 aaKnown RBP18.96■□□□□ 0.63
NPC1-205ENST00000587163 CNNM2Q9H8M5 875 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 819.4 ms