RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	SEPT14	Q6ZU15	432 aa		18.89	■□□□□ 0.61
TCF3-208	ENST00000586318	PRDM10	Q9NQV6	1147 aa		18.89	■□□□□ 0.61
TCF3-208	ENST00000586318	POLR3E	Q9NVU0	708 aa		18.89	■□□□□ 0.61
TCF3-208	ENST00000586318	CEP131	Q9UPN4	1083 aa		18.89	■□□□□ 0.61
TCF3-208	ENST00000586318	CLIC4	Q9Y696	253 aa		18.89	■□□□□ 0.61
TCF3-208	ENST00000586318	SPATA31C2	B4DYI2	1134 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	TBX3	O15119	743 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	AR	P10275	920 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	GRK4	P32298	578 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	NASP	P49321	788 aa	Predicted RBP	18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	KRT85	P78386	507 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	SEMA3F	Q13275	785 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	POTED	Q86YR6	584 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	SCFD2	Q8WU76	684 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	KCNMB3	Q9NPA1	279 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	KCNH7	Q9NS40	1196 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	CFAP45	Q9UL16	551 aa		18.88	■□□□□ 0.61
TCF3-208	ENST00000586318	LAD1	O00515	517 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	MSH4	O15457	936 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	TGFB3	P10600	412 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	CYBA	P13498	195 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	ATP2C1	P98194	919 aa	Predicted RBP	18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	PTGDR	Q13258	359 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	TTLL4	Q14679	1199 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	PTPA	Q15257	358 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	PKN2	Q16513	984 aa	Known RBP	18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	CALCRL	Q16602	461 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	PRAMEF19	Q5SWL8	479 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	C4orf32	Q8N8J7	132 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	ETNPPL	Q8TBG4	499 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	TNPO1	Q92973	898 aa	Known RBP	18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	FAM20A	Q96MK3	541 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	TMEM60	Q9H2L4	133 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	AGO4	Q9HCK5	861 aa	Known RBP	18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	PDGFC	Q9NRA1	345 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	TFIP11	Q9UBB9	837 aa	Known RBP	18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	MRVI1	Q9Y6F6	885 aa		18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.87	■□□□□ 0.61
TCF3-208	ENST00000586318	BAG4	O95429	457 aa	Known RBP	18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	YEATS4	O95619	227 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	OR52Z1	P0C646	297 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	CEBPZ	Q03701	1054 aa	Known RBP	18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	CACNB2	Q08289	660 aa	Predicted RBP	18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	TRIM32	Q13049	653 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	MAP3K21	Q5TCX8	1036 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	IQSEC1	Q6DN90	963 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	CCDC62	Q6P9F0	684 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	HAS1	Q92839	578 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	SLC5A5	Q92911	643 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	MTMR9	Q96QG7	549 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	ZNF577	Q9BSK1	485 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	TCHH	Q07283	1943 aa		18.86	■□□□□ 0.61
TCF3-208	ENST00000586318	ARIH2	O95376	493 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	INHA	P05111	366 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	PRKAR2A	P13861	404 aa	Known RBP	18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	PRPH	P41219	470 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	SLC39A14	Q15043	492 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	CCDC144B	Q3MJ40	725 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	SLFN12	Q8IYM2	578 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	LINC00301	Q8NCQ3	95 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	TRPV1	Q8NER1	839 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	CHAMP1	Q96JM3	812 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	SENP7	Q9BQF6	1050 aa		18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	DDX41	Q9UJV9	622 aa	Known RBP	18.85	■□□□□ 0.61
TCF3-208	ENST00000586318	NFASC	O94856	1347 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	IPO5	O00410	1097 aa	Known RBP	18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	NKRF	O15226	690 aa	Known RBP eCLIP	18.84	■□□□□ 0.61	2e-6	■■□□□ 13.4
TCF3-208	ENST00000586318	MARCH6	O60337	910 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	ATP9A	O75110	1047 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	TXN	P10599	105 aa	Known RBP	18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	KCNA2	P16389	499 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	NCL	P19338	710 aa	Known RBP	18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	UBA1	P22314	1058 aa	Known RBP	18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	ADCYAP1R1	P41586	468 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	STK38	Q15208	465 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	RIT2	Q99578	217 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	TBC1D22B	Q9NU19	505 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	FAM184B	Q9ULE4	1060 aa		18.84	■□□□□ 0.61
TCF3-208	ENST00000586318	AKR1A1	P14550	325 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	SP2	Q02086	613 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	ITGB3BP	Q13352	177 aa	Predicted RBP	18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	NEDD9	Q14511	834 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	LY6K	Q17RY6	165 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	SLC9C1	Q4G0N8	1177 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	DUSP28	Q4G0W2	176 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	CLEC17A	Q6ZS10	378 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	SDF4	Q9BRK5	362 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	TEKT3	Q9BXF9	490 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	PKD2L1	Q9P0L9	805 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	RCOR1	Q9UKL0	485 aa		18.83	■□□□□ 0.6
TCF3-208	ENST00000586318	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.82	■□□□□ 0.6
TCF3-208	ENST00000586318	SPTLC2	O15270	562 aa		18.82	■□□□□ 0.6
TCF3-208	ENST00000586318	DHX15	O43143	795 aa	Known RBP	18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms