RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 TIMP1P01033 207 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 CD4P01730 458 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 HOXD8P13378 290 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 UBA1P22314 1058 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 ADD1P35611 737 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 TOB2Q14106 344 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 ANKRD1Q15327 319 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 CELF3Q5SZQ8 465 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 TRIM22Q8IYM9 498 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 TRIM43Q96BQ3 446 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 SENP7Q9BQF6 1050 aa11.93□□□□□ -0.5
SMARCA4-209ENST00000586122 GRIN2DO15399 1336 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 SMCO2A6NFE2 343 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 SPATA31C2B4DYI2 1134 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 CPLX1O14810 134 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 CDKL5O76039 1030 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 GGPS1O95749 300 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 PTGS1P23219 599 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 GNA11P29992 359 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.53e-6■■■□□ 17.4
SMARCA4-209ENST00000586122 FPGSQ05932 587 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 NTRK3Q16288 839 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 LRIT3Q3SXY7 679 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 METTL7BQ6UX53 244 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 SH3RF1Q7Z6J0 888 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 SESTD1Q86VW0 696 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 BICD2Q8TD16 824 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 BADQ92934 168 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 SPATA33Q96N06 139 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 UPF3BQ9BZI7 483 aaKnown RBP11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 ZMYND12Q9H0C1 365 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 MLXIPQ9HAP2 919 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 C6orf50Q9HD87 102 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 SH3GLB2Q9NR46 395 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 PCDHA6Q9UN73 950 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 PCDHA8Q9Y5H6 950 aa11.92□□□□□ -0.5
SMARCA4-209ENST00000586122 F2P00734 622 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 PSMC6P62333 389 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 PPIGQ13427 754 aaKnown RBP eCLIP11.91□□□□□ -0.54e-7■■■■■ 27.3
SMARCA4-209ENST00000586122 UBE2SQ16763 222 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 TYW1BQ6NUM6 668 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 GPR153Q6NV75 609 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 TMEM199Q8N511 208 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 UBIAD1Q9Y5Z9 338 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 RANBP2P49792 3224 aaKnown RBP11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 KAT6AQ92794 2004 aa11.91□□□□□ -0.5
SMARCA4-209ENST00000586122 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 B4GALT4O60513 344 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 DEXIO95424 95 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 SLC34A2O95436 690 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 SREBF1P36956 1147 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 SSRP1Q08945 709 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 MTMR1Q13613 665 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 PKN1Q16512 942 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 FAM47CQ5HY64 1035 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 REXO1Q8N1G1 1221 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 SLC26A6Q9BXS9 759 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 ANO3Q9BYT9 981 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 HIPK3Q9H422 1215 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 DOCK5Q9H7D0 1870 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 JADE2Q9NQC1 790 aa11.9□□□□□ -0.5
SMARCA4-209ENST00000586122 HAS3O00219 553 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 ITGB5P18084 799 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 CCT2P78371 535 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 SP2Q02086 613 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 SEMA3FQ13275 785 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 BFSP2Q13515 415 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 HSDL1Q3SXM5 330 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 GALNT17Q6IS24 598 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 NIPA1Q7RTP0 329 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 CCDC155Q8N6L0 562 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 IL27Q8NEV9 243 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 KAT2BQ92831 832 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 PHKBQ93100 1093 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 NOC4LQ9BVI4 516 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 SLKQ9H2G2 1235 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 RTEL1Q9NZ71 1219 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 ZNF215Q9UL58 517 aaPredicted RBP11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 NOD1Q9Y239 953 aa11.89□□□□□ -0.51
SMARCA4-209ENST00000586122 STK36Q9NRP7 1315 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 PFKFB2O60825 505 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 PFKMP08237 780 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 ITGB8P26012 769 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 PSEN2P49810 448 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 MFSD10Q14728 455 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 KIAA0753Q2KHM9 967 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 CEP55Q53EZ4 464 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 PSRC1Q6PGN9 363 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 C7orf31Q8N865 590 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 MXRA8Q9BRK3 442 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 PPP1R12CQ9BZL4 782 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms