RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 PXMP2Q9NR77 195 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 DIAPH3Q9NSV4 1193 aa12.47□□□□□ -0.41
CSNK1D-226ENST00000585026 NEDD4P46934 1319 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 LCHNA4D1U4 455 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 HAS3O00219 553 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 TGFB3P10600 412 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 SDSP20132 328 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 GPNMBQ14956 572 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 PTPROQ16827 1216 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 IMMTQ16891 758 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 PUS10Q3MIT2 529 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 FAM117BQ6P1L5 589 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 SPATA33Q96N06 139 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 CPVLQ9H3G5 476 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 UBE2ZQ9H832 354 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 COL20A1Q9P218 1284 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 MTUS1Q9ULD2 1270 aa12.46□□□□□ -0.41
CSNK1D-226ENST00000585026 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.42
CSNK1D-226ENST00000585026 LCTP09848 1927 aa12.46□□□□□ -0.42
CSNK1D-226ENST00000585026 CHD9Q3L8U1 2897 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 RSPH10B2B2RC85 870 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 RSPH10BP0C881 870 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 ZNF286BP0CG31 522 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 HSD17B4P51659 736 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 LEXMQ3ZCV2 418 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 CELF3Q5SZQ8 465 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 ZNF618Q5T7W0 954 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 TTC22Q5TAA0 569 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 TMCO2Q7Z6W1 182 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 SEPT8Q92599 483 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 JMJD4Q9H9V9 463 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 MLXIPQ9HAP2 919 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 ZSWIM5Q9P217 1185 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 FAM50BQ9Y247 325 aa12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-226ENST00000585026 SCN5AQ14524 2016 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 C17orf102A2RUQ5 167 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 B4E1Z4 1266 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 PI4K2BG5E9Z4 385 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 ZBTB5O15062 677 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 CAND2O75155 1236 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 GGPS1O95749 300 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 GNAT1P11488 350 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 HOXD8P13378 290 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 CCND2P30279 289 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 THPOP40225 353 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 GHRHRQ02643 423 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 TRIM71Q2Q1W2 868 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 IFIT1BQ5T764 474 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 MYSM1Q5VVJ2 828 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 CWC27Q6UX04 472 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 MYOCDQ8IZQ8 938 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 GJD3Q8N144 294 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 ENAHQ8N8S7 591 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 DBF4BQ8NFT6 615 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 MRPL38Q96DV4 380 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 PDCD2LQ9BRP1 358 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 PCDHA1Q9Y5I3 950 aa12.44□□□□□ -0.42
CSNK1D-226ENST00000585026 TANC1Q9C0D5 1861 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 ALADP13716 330 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 KCNA5P22460 613 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 SSTR3P32745 418 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 GNPTABQ3T906 1256 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 TIGD5Q53EQ6 642 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 STOX1Q6ZVD7 989 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 SPRED2Q7Z698 418 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 SERINC5Q86VE9 423 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 VSIG10LQ86VR7 867 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 FAM178BQ8IXR5 827 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 ATP6V0A1Q93050 837 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 YME1L1Q96TA2 773 aa12.43□□□□□ -0.42
CSNK1D-226ENST00000585026 PRR33A8MZF0 331 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 H3BRB1 525 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 NOP56O00567 594 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 STAM2O75886 525 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 HTRA4P83105 476 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 ZNF200P98182 395 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 TRDNQ13061 729 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 PGM5Q15124 567 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 HSDL1Q3SXM5 330 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 PLEKHG4Q58EX7 1191 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 TET1Q8NFU7 2136 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 APBB2Q92870 758 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 USP26Q9BXU7 913 aa12.42□□□□□ -0.42
CSNK1D-226ENST00000585026 TUT1Q9H6E5 874 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms